Cyprinodon variegatus (sheepshead minnow): 107087003
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Entry
107087003 CDS
T06110
Symbol
ift57
Name
(RefSeq) intraflagellar transport protein 57 homolog isoform X1
KO
K04638
intraflagellar transport protein 57
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvg03037
]
107087003 (ift57)
Cilium and associated proteins [BR:
cvg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
107087003 (ift57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT57
COG3_N
PHM7_cyt
DUF5063
MG280
Exonuc_VII_L
DUF1664
DUF745
Motif
Other DBs
NCBI-GeneID:
107087003
NCBI-ProteinID:
XP_015233813
Ensembl:
ENSCVAG00000010926
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MAEGGRRGEEEDRGPGAAYQEFVLMENLLDKLKLLNYEEEVLVKHNMKNLTRHYFVSSPY
LPSNPGEQFYMFTIIAAWLINVAGRPFPEPQEYDEPYANVSNILAELRAFGVKVDFPPSK
LVSGSGEYVCLVLDHLANQALKKTGFTFRRPNYPEENQEEESVINDDAELTLSKVEEEMI
DEADDDEENLMDLEALKLWRAPTQEAERSSKPDEILESTVDAAEWRLEVERVLPQLKVTI
RADNKDWRNHLDQMHQHRDGIKSSLKETESYLDNLQVDIGKTLEKVSSREKYINRQLENL
IQEYRNAQAKLSEEKELYKQACGGVTEKTRVLAEISEELEKVKQEIEDKGRSMSDGGPVV
KIKQSFTKLKQEITQMDVRTGVVQHQLLQAELMVKSNMTRDMHATEHTAGPLG
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtggaagacgtggagaggaggaggaccgtgggcccggagcggcttaccag
gagtttgtgttgatggagaaccttctggataaactgaagctgctgaactatgaggaggaa
gttctagtgaaacacaacatgaagaacctgaccagacattactttgtctccagtccctac
ctgccatccaaccctggcgagcagttctacatgttcaccatcatcgctgcctggctcatc
aacgttgcgggaaggcctttcccagaacctcaggagtacgatgagccctacgccaacgtg
tctaacatcctggcagaactccgggcttttggtgttaaggtggacttcccaccctccaaa
ctggtgtctggttccggcgagtacgtctgtttagttttggaccatctggccaatcaggcg
ctgaagaagacaggcttcacctttagaagaccaaactatcctgaagaaaaccaagaggaa
gagtctgtgatcaacgatgatgcggagctcacgcttagcaaagtggaggaggagatgatt
gatgaagctgacgatgacgaggagaacctgatggacctggaggccctgaagttatggaga
gctcccactcaggaagcagaaaggagctccaaaccggacgagatcctggagtccactgtg
gacgctgcagagtggcggctggaggtggagagagttctgccgcagctcaaagtcaccatc
agggcagacaacaaggactggaggaaccatctggaccagatgcatcaacacagagacggg
atcaagtcatcgctcaaagagaccgagagctatctggacaatcttcaggtagacatcggg
aagactctggagaaggtgagcagcagagagaaatacatcaaccgccagctggagaacctg
atccaggagtaccgcaacgctcaggccaaactcagcgaggaaaaggagctctacaagcag
gcatgcggaggagtgacagagaaaaccagagtcctggcagagatcagtgaggagctggag
aaggtaaagcaagagatagaagacaagggccgcagcatgtctgatggaggccccgtggtg
aagatcaagcagagcttcactaagctgaagcaggagatcacccagatggacgtgaggaca
ggcgtggttcagcaccaactgctgcaggccgaactcatggtgaaatccaatatgacacgt
gacatgcacgccaccgaacacaccgctgggcctttgggctag
DBGET
integrated database retrieval system
