Cyprinodon variegatus (sheepshead minnow): 107087033
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Entry
107087033 CDS
T06110
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cvg01001
]
107087033 (lrrk1)
Enzymes [BR:
cvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107087033 (lrrk1)
Protein kinases [BR:
cvg01001
]
Serine/threonine kinases: TKL group
LRRK family
107087033 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
COR
Roc
Ank_2
Ras
Ank
Ank_4
Arf
LRR_9
Gtr1_RagA
Methyltransf_11
TniB
Motif
Other DBs
NCBI-GeneID:
107087033
NCBI-ProteinID:
XP_015233853
Ensembl:
ENSCVAG00000008882
LinkDB
All DBs
Position
Unknown
AA seq
1795 aa
AA seq
DB search
MSYWAVGVSQETGEPPNNMEQTNSTGGETEAKVSLVEAPGPDSEITPSLENIKAAYEGGD
EEAARELIQQACCVDCSGGIHPDGVRLLSLATQHSDIVSVCYLLKEARIPVPQEPSLCNP
AVLAAHCGFSNLLKELLDSIPSVCLKRDLVNCLLATACQQGHLEVVRLLVHSYEADVKDF
AIHSNEFAVLCGLPLYAAAQASNEEIAHFLIENGAEFSSYTLMDYPDFSKRLLRQKLHET
TGANGVEGVSVYWSGLQLPFLELDWIMDVCSQITHLDLSSNSLSALPSVVPWGLIHLKTL
DLSSNALKELPFAQNSQDVICCRLQVVTLSHNQLKSLPTGLLHLTRLQKLSAANNQLTTL
FDIPSNVNWIGLRKLEVLDVSGNSLTSLHTSVMHCLKSLRCLDVSRNRLRAFPDPWACPL
RICKASSNIIENLPNTISIFWRTQLQEVDFSDNCLKELPSYIFELEAIMSLKLCGNLIET
LPAPNKWKCSKLKTLDLSRNVLGRTEEGPRSRRLAFLTTWNRRDPDPVSPIEFPGVLRDS
LEVLTLNDNQLECVPQSLCGLRNLTELYLSNNPGIRELPAELGQLSNLWQLDIDNLNITN
IPQAVRKEGSASVLAFLRAQLRKAEPCRLLKMLVVGPPRQGKSALVEALLTGKASPFTPS
ECSISTFGLELEKPNSGKNNKESIMFNLWDIGGPASMTTVNQCFFTDKSLYVVIWNLALG
EEAVANLQTWLLNIEARAPNSAVVVVGTHLDLIDTKFRTERLATLRAYVLALCRSPSGAR
AAGYPDITFKHLHEVSCKTLEGLEGLKTLIYQVALSMKDSGSSACGAKLLGRLIPRSYFI
LQEAVIAEKERRDAAEEVQYLTDAQLLSIIEQNPESDIRDYEDLQTAISFLIETGTLLHF
PDTSHGLCTLYFLCPVWLSDCLERIVHLNSCRPLPKNGLIQTEQLRKLLEGTGFTRETEE
QYFQFLAKFEIALPVANNRYLLPHLLPPKPAMDIHSFHHHTNNTLQRLFKMSFVPAGFWE
RFIARMLISLTEMDLQSSDPLKRRSKNRRSSLIYSFAGSQQRNRCSTFRVRRSQTIYWKE
GLLVTFDGGYLSVESSDVNWKKIKSGGIKIICQSDVRDFSAMAFITDHVNSLIEQWFPAL
TGSQNDGSLLIEQYVPCSLCAPCERQQQDPGEDDRGREAEVHYFNMEDCVLAAVEKDSII
CPQHPEQPVPLQELVPELFMTDFPARLFLDKAELQLSEEEKDVLGQGGSGTIICRAMYKD
QPVAVKHFHFKRCRQLTVSKDSEFMNCIRPMASRCVRQMEEPSFPCLRYLLSCDSQSQLF
LSQLQGYSAVFWNGDNEERNYSVVNVEKAQVEVKRMCCPGNRISCQMKMRNSLWMATEEQ
EVFIYSLKDMCPLSQPQKRLSCPAVVTSLFHVPAGEQNLAKVFAGMSDGLVAVYTLVDDL
PLDGETYLCSHTLNKTVFGLKDSDPRQRPYPVRSMALVSSGSQLWFSNGPGLLVIDTTSL
QAVRRLEPYRTPSSVISMTTSFSLWGEEAVWTLDDTSNTLLLYYAASYELCASYCCGDRS
PLRDVFDVLRPAGLAVVAEEDINTTDQNGKLEWSNGDVTLIFSEEAGTQIIQHQDSVTDY
CSLSSTSSLEPPESNTLSTTDCSSLKSRGCLPLPQNPEDSEEHQDEQTDTDNLDSAEDIN
PATPELQAFNLLPVNGTLWIPRHGGDIIIIEMQPYGGQLRGRVTAVLAPPGRSSLGTLQE
AALVAKDTVVCGFQQEENMEWCLVVWRAWSSSEISVFYQSYEELYRSESNIRIRR
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactgggctgtcggagtttcccaagaaactggagagcctcccaacaacatggag
caaactaacagcacagggggggaaacagaggccaaggtgtcccttgtggaggcccccggt
cccgactccgaaataactcccagtcttgagaacatcaaggcagcttatgaaggtggtgat
gaggaagcagccagggagctgattcagcaggcctgttgcgtggactgttcaggggggatc
catcccgacggggtccgtctgctgtctctggccacccagcactctgatatagtgagtgtg
tgctacctcctgaaagaggcccgtatccctgttcctcaggagccgtcgctctgtaacccg
gctgtcctggcggcacattgcggtttttccaacctgctcaaggaactgctggattccata
cctagtgtttgcctgaaaagagacctggtgaactgcctgctcgccaccgcctgtcagcag
ggtcacttggaagtggtccgtctgctggtccacagctacgaggcagatgtgaaggacttt
gccatccatagcaacgagtttgctgtgctctgcgggctgccgctgtacgcggctgctcaa
gcaagtaacgaggagattgctcacttcctgatagaaaacggagctgaattttcatcctac
accctgatggactatccagacttcagcaaacgtctcctgagacagaaacttcatgaaacc
actggtgccaatggagtggagggagtcagcgtgtattggagcggcttacagctgcctttc
ctggagctggactggatcatggatgtctgctcacagattacccacctggacctgtcctcc
aacagcctcagtgctctgccctccgtcgtcccctgggggctcatccacctgaaaactctg
gatctttccagcaacgctctgaaagagctgccgtttgctcagaactcgcaggatgtgatc
tgctgcaggttacaggttgtgacactctcccataaccagctaaagagtttaccaacggga
cttctccatctgacccgccttcagaaactcagtgctgctaataaccagctcaccaccctg
ttcgacatcccctccaatgtgaactggatcggtctccgtaagctggaggtgctggatgtg
tctggaaatagtttaaccagtcttcacacgtcagtcatgcactgtttaaagtccctgcgc
tgccttgatgtcagcagaaacagattgagggctttccccgacccctgggcctgtccgctg
aggatctgcaaagcttcttctaacatcatcgagaaccttccaaacaccatatccatcttc
tggaggactcagctgcaggaggttgatttctctgacaactgcctgaaggagcttccctca
tatatctttgaactggaggcgatcatgtccttaaagctgtgtgggaacctcatagaaaca
ctgcctgctcccaataagtggaagtgctctaagctcaagactctggatctttccaggaac
gtgctcggcaggactgaagaaggtcccagatccaggaggcttgctttcctgacaacatgg
aacaggagggatccagatccagtgagtcccatcgagtttcctggtgtcctgcgggattcc
ctggaagtgctcaccttgaacgataaccagctggagtgtgttccccagtcactgtgtggc
ctgcgcaacctcactgagctctacctgtccaataatccaggaatccgggaattaccagct
gaactcggacagctatccaacctctggcagctggacatcgacaacctcaacatcaccaat
attcctcaagcagtaagaaaagaaggctctgcttcggtcctggcgttcctccgggcccag
cttcgaaaagcagagccctgcaggctgctgaagatgcttgtggtcggtccacccaggcag
gggaagtcggcgcttgtagaggctctactgacaggcaaggcgtctcccttcaccccctca
gaatgcagcatctctacttttggcttggagctagaaaaaccgaactcaggcaaaaataac
aaggagtcgataatgttcaacttgtgggatattggtggtccagccagcatgaccactgtg
aaccagtgtttctttactgataagtcgctttatgtggtcatctggaatctggctctggga
gaggaggctgtggccaacctgcaaacctggcttctcaacatagaggcacgagcacccaac
tctgccgtggtggttgtaggaacccatctggatctcatagataccaagttccgcacagag
aggctggcaaccctgagagcttatgtactggcgctgtgtcgatccccgtccggagcaaga
gcagcgggttaccccgacatcaccttcaaacacctgcatgaagtgtcgtgtaaaaccttg
gagggtttggaaggtctgaagacgctgatctaccaggtggctctctccatgaaggacagc
ggcagctcggcctgtggtgctaagctgctgggcagactgattccgaggagctatttcatc
ctgcaggaggcagtgatagcagagaaggagaggagagatgctgcagaagaagtgcagtac
ctgacagacgctcagttactcagcatcatcgaacaaaacccagagagtgatatcagagat
tatgaggatttacaaaccgccatcagtttcctaattgaaactgggaccctgctgcacttc
ccagacaccagccatggcctgtgtactctgtacttcctgtgtcccgtgtggctgtcagac
tgcttagagaggattgtccatctaaactcctgtcgccctttacccaaaaacggattgatc
cagacagagcagctcaggaagctgctggaaggaacaggattcacccgggaaacagaggag
cagtatttccagtttttggccaagtttgagattgcgctccctgttgccaacaacagatac
cttctgcctcacctgcttcctccaaagccggccatggacatccacagcttccaccatcac
accaacaacaccctgcagcggcttttcaagatgagctttgttcctgcggggttttgggag
cgcttcatcgccaggatgctcataagcctcacagagatggacctccagtcgtctgatcca
ctcaagagaaggagcaagaatcgcaggagttcactgatctacagctttgctggaagccag
cagaggaaccgatgcagcaccttcagggtccgacgcagccagaccatctactggaaggag
gggctcctggtcacatttgatggaggttacctcagtgtggagtcatcagatgttaactgg
aagaagataaagagcggcggcataaagatcatctgtcagtcagacgtgagagatttctcc
gccatggccttcatcactgaccatgtcaactctctgatcgagcagtggtttcccgctttg
accggctctcagaatgatgggagtctcctcattgagcagtatgtgccctgttccctctgt
gcgccttgcgaacggcagcagcaggatcccggagaagacgacagaggaagagaagccgag
gttcattactttaacatggaggactgtgtgctggctgctgtggagaaggacagcatcatc
tgtcctcagcatcctgagcagcctgtccccttacaagaactggtgccagaactctttatg
accgacttccctgcacggctgtttctggataaggcggagcttcagctctctgaggaggag
aaggatgtcctcggtcagggcggcagtggcaccatcatctgcagagccatgtataaagac
caacctgtcgctgtcaaacactttcactttaagagatgtcggcagctgactgtcagcaag
gactcagagttcatgaactgcattaggccgatggcatccaggtgtgtgagacagatggag
gagcccagtttcccctgcctgaggtacctgctgtcatgtgacagccagtctcagctcttc
ctgtcgcagctgcagggatacagcgccgtgttctggaatggagacaatgaggagagaaac
tacagtgtggtgaatgtggagaaggcccaggtggaggtcaagaggatgtgttgtcctggc
aacaggatcagctgccagatgaagatgcgtaactctctgtggatggctactgaggaacag
gaggtgttcatctacagcctgaaggacatgtgtcctctaagtcagcctcagaaacggctg
tcctgtccagctgtcgtcacaagtttgttccacgttcccgccggagaacagaacttggcc
aaagtgtttgcagggatgtctgacggtctggtcgccgtctacaccttggtggacgacctc
cctctcgatggagaaacgtacctgtgttctcacaccttaaacaagactgtatttggtctg
aaggactctgatccgaggcagagaccctaccctgtcaggagcatggctctggtcagcagc
ggctcgcagttgtggttctccaacggccccggcctgctggttatcgacacgacgagtctt
caggcggtccgaaggctagaaccatacaggacaccgtcctccgtcatcagcatgacgacc
agcttcagtctgtggggagaggaagcagtgtggaccctggacgacaccagcaacacgctg
ctgctctactacgccgcctcctacgaactgtgtgcatcgtactgctgtggggacagaagt
cctttgcgggatgtcttcgacgtgctgcgccctgcagggctggctgtggtggcagaggaa
gatattaacactacggaccaaaacgggaagcttgaatggtctaacggagacgtgacgctg
attttcagtgaggaggcaggaactcaaataatccagcaccaggactctgtgacagactat
tgctccctatcatctaccagctctctggaaccaccagagtcaaacaccctgagcaccaca
gactgcagctcattgaaaagtagaggctgtttacctctgcctcaaaacccggaggactca
gaagagcatcaggacgaacagacagatacagataatctggactcagcagaggacataaac
cctgcaacacctgagctgcaagccttcaatctgctgccggtgaacgggaccctgtggatc
cccaggcatggaggtgatataataatcattgaaatgcagccatatggaggtcagctgcgg
gggcgggtcaccgctgtcctcgctcctcctggacgctcctctctggggactctgcaggag
gcagcgctggtggcgaaggacacggtggtatgcggcttccagcaggaggaaaacatggag
tggtgcctggttgtctggagagcctggagcagcagcgagatcagcgtcttctaccagtcc
tacgaggaactctaccgctctgagagcaacataaggataagaaggtag
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integrated database retrieval system
