Cyprinodon variegatus (sheepshead minnow): 107087039
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Entry
107087039 CDS
T06110
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1 isoform X1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107087039 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107087039 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107087039 (uba1)
Enzymes [BR:
cvg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
107087039 (uba1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
107087039 (uba1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107087039 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
107087039 (uba1)
Exosomal proteins of colorectal cancer cells
107087039 (uba1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Viral_DNA_Zn_bi
Motif
Other DBs
NCBI-GeneID:
107087039
NCBI-ProteinID:
XP_015233858
Ensembl:
ENSCVAG00000009480
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
MSSSPLSKKRRLSGTETKTGSHCSSSNSVRTDLSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHEAMKRMQNSNVLISGMRGLGVEIAKNVILGGVRSVTVHDQGVAEWRDLSSQFYLRE
EDLGKNRAEVSQPRLAELNNYVPVTAYTGELSEDYLTKYQVVVLSNSSLEEQKRLGEFCH
SKGIKLVIADTRGLFGQLFCDFGEEMVVYDTNGEQPLSAMISMITKDNPGVVTCLDEARH
GFESGDYVTFTEVQGMTELNGCRPVEIKVLGPYTFSICDTTGFSDYIRGGIVSQVKMPKK
ITFKSYESSLAEPEFIMTDFAKFDRPGQMHIGFQALHAFQKKHSRLPAPWNQADGDELLT
LAKELNSAQTGSAKVEELDEALIKKMSYLAAGDLSPVNAFIGGVAAQEVMKASTGKFMPV
MQWLYFDALECLSEGEDCMLTEEECRPRNTRYDGQVAVFGTKLQTLLGNQRYFLVGAGAI
GCELLKNFAMMGLGSEGGEVIVTDMDTIEKSNLNRQFLFRPADVTKMKSDTAAAAVKQMN
PTIKITAHQNRVGPETERVYDDDFFENLDGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNIQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQAP
ENAMQYLTDPKFMERTLKLPGAQPVEVLEAVYKSVVTDCPHSWADCVAWARNHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFSTSNDLHVDYVMAAANLFAQSYGLPV
STDRAGVIKILQEVKVPVFTPRSGVKIHVSDQELQNSNSSVADDSKLEELKSHLPTPESF
QFKLSPIDFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAA
VVGLVCLELFKIIQGHKKLESFKNGFMNLALPFFAFSEPIAAPKHKYYEIDWTLWDRFEV
KGVQPTGEEMTLRQFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTEIVT
KVSKKKLGKHVKALVFELCCNDQTDEDVEVPYVRYTIR
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcttgtcaggaacagagacgaagacggga
tcccactgctcctcctctaactctgtcagaactgatctgtcccatacacctgcaaacggc
atggctaagaatggcaatgatgctgagattgatgaaggcctgtactccagacaactatat
gtgctgggccatgaagcaatgaagcgcatgcagaactccaatgtcctcatttctggaatg
agaggtcttggagttgagattgcaaaaaatgtcattttgggtggagttagaagtgtcacc
gtgcatgaccaaggagttgcagaatggagagacctctcttcccagttttacctccgtgaa
gaggacctgggaaagaacagagcagaggtgagtcagcctcgcctggctgaactcaacaac
tatgttccagtgacggcgtataccggagaactctctgaagactaccttaccaagtaccag
gtggtggtgctctctaactcaagcctagaagagcagaagcggttgggggagttttgtcac
agcaaaggaatcaagctggttattgctgacacacgcggtctgtttgggcaacttttctgt
gactttggagaagaaatggtggtgtatgacaccaatggagagcagccactgagtgctatg
atttccatgatcaccaaggacaatccaggtgttgtaacttgtcttgatgaggctcgtcac
ggctttgagagtggagattatgtgaccttcactgaggttcagggaatgactgaactcaat
ggctgcaggcctgtggaaattaaagttcttggcccatacacgttcagcatctgcgacaca
actggcttttcagactacattagaggagggatcgtttctcaggttaagatgcccaaaaag
atcacttttaaatcttatgaatcttccttggctgaaccagagttcataatgacagatttt
gccaagttcgatcgtccgggacaaatgcacataggctttcaggctctccatgccttccag
aagaaacacagtcgccttcctgcaccatggaaccaggctgatggcgatgagctattgact
ttggccaaagagctgaactctgcccagacggggtctgccaaagtggaggaactggatgag
gctcttatcaagaagatgtcatatctcgctgctggtgatctttccccagtcaatgccttc
attggtggagtggctgcacaggaagtgatgaaggcatccactgggaagtttatgcctgta
atgcagtggctatactttgatgctttggagtgcctttctgaaggagaggactgcatgctc
acagaagaagagtgtagacccaggaatactcggtatgatggacaggttgcagtgtttggt
accaagttgcagacactgcttggcaaccagcgctacttcctggttggagctggagcaatc
ggctgtgagctgttgaaaaatttcgctatgatggggctgggcagtgagggcggtgaggtt
atcgtcacagacatggacaccatcgagaaatccaatctcaacagacagttcctcttcaga
cccgctgatgtcacgaaaatgaagagtgatacagcagctgctgcagtaaagcagatgaac
cccaccattaagatcacagctcatcagaacagagtcggtccggagactgagagggtctat
gacgacgacttctttgaaaatctagatggagtcgctaatgcactggacaatgttgatgca
cgtatgtacatggatcggcggtgtgtttactaccgtaaacctctactggagtctggtact
ttgggcactaaaggcaacatccaggtggtgatccccttcctcacggagtcctacagttcc
agccaagacccacctgagaagtccatccccatttgtaccctgaagaactttccaaatgca
attgaacacacactgcagtgggctcgggatgagtttgagggactcttcaaacaggcacca
gagaatgctatgcagtacctcacagaccccaagttcatggagcgaactctgaagcttcca
ggagcgcagcctgtggaggtgctggaggctgtttacaagagtgttgttacagactgtccg
cacagctgggccgactgtgtagcttgggctcgcaatcactggcagtgccagtacagcaac
aacattcgtcagcttttgcacaacttccccccagatcagctcaccagctcaggcgccccc
ttctggtctggcccaaagagatgtccccaccccttagaattcagcactagcaatgacctc
catgtggattatgtaatggcagctgcaaacctctttgcccagtcctatggcctgccagtc
agcaccgaccgagcaggtgtgatcaagatcttgcaggaggtcaaagtgccagtttttact
cctcgctcaggggttaaaatccatgtctctgaccaggagctgcaaaatagcaattcctct
gttgcagatgactccaaattggaagaactgaagtctcatttgcctaccccagaatcattc
caattcaaactcagccccatcgactttgaaaaggatgacgatacaaacttccacatggat
ttcattgtggctgcctccaatttgagagcagagaactacgacattccacctgctgacagg
cataagagcaaactgattgctggcaagatcattccggctattgccactactacagctgca
gtggtcggccttgtctgcctggagcttttcaagatcatccaaggacataaaaagctggaa
tcattcaaaaacggcttcatgaacttggccctaccgttctttgccttctctgagcccatt
gctgctcccaaacacaagtactatgagattgattggactctctgggatcgcttcgaggtc
aagggtgtgcagccaactggggaggaaatgacactccgacaattccttgattactttaaa
aatgagcataagttggagatcaccatgctatctcagggagtctccatgctgtattcattt
ttcatgcctgctgccaaacttaaagaaagactggacctaccgatgactgagattgtgact
aaggtgtccaaaaagaaactgggcaaacatgtgaaagccctggtgtttgagctgtgctgc
aacgaccagacggacgaagacgtggaagtgccctatgtcagatacaccattcgctga
DBGET
integrated database retrieval system
