Cyprinodon variegatus (sheepshead minnow): 107087047
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Entry
107087047 CDS
T06110
Symbol
bgn
Name
(RefSeq) biglycan
KO
K08118
biglycan
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107087047 (bgn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvg00535
]
107087047 (bgn)
Proteoglycans [BR:
cvg00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
107087047 (bgn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_14
LRR_5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
107087047
NCBI-ProteinID:
XP_015233874
Ensembl:
ENSCVAG00000009742
UniProt:
A0A3Q2DZA8
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MLRHCSLLLLLCGAQLLSISSALPFEQKGFWDFALDSLENGGMMTMMRDQEEGSAIEEIP
SPDVPTCPFGCHCQYRVVQCSDLGLREVPKNIPSDTRLLDLQNNHITELKENDFKGLTNL
YALSVRNNRISKVHPKAFAPLKNMKKLYFSKNLLTTIPKNLPASLVELRIHENQIKKVAA
GTFKGLGNMHCIEMGANPIQNSGFEPGAFKGLKLNYLRISEAKLTGVPKDLPESLHELYL
DHNQIQAVELEDLSRYKNLNRLGLGFNHIRNIEKGSLSFLPMLRELHLDNNRLTSVPQGL
ASLKYLQVVYLHSNNIRQVGVDDFCPRGFGMKRTYYNGISLFDNPVNYWEVQPATFRCVN
DRFAIQFGNYKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacattgctccctcctgttattgctttgcggagcccagctgctctctatctcc
tctgctttgccctttgaacagaagggcttttgggactttgccctggacagtctggagaac
ggcggaatgatgacaatgatgagggatcaggaggaaggttcggctatagaggagatcccc
tctcccgacgtgcccacgtgtccctttggctgccactgccagtaccgggtggtccagtgc
tctgatctcggtttgagagaagttccaaagaatattccttcagacaccaggctcctggac
ttgcagaacaaccatatcactgagctaaaagaaaatgacttcaagggccttactaactta
tacgcactatctgtgaggaataacaggatttccaaagtccaccccaaagcatttgctcct
ttgaagaacatgaaaaagctgtacttctcaaagaatctgctcaccaccatcccgaaaaac
ctgcctgcctctctggttgagctcaggattcatgaaaaccagatcaagaaggtggcagct
ggaaccttcaagggactgggcaacatgcactgcatagaaatgggagctaaccctatccag
aacagtggttttgagcctggtgcctttaagggcctgaaactgaattatctgcgcatatca
gaggccaagctaactggagtgcctaaagatcttccagagagccttcatgagctttatctg
gaccacaatcagatccaggcagtggaactggaggacctgagccgctacaaaaaccttaac
agattgggtcttggttttaatcacattcgcaacatagagaagggcagtttgtcctttttg
cctatgctgagggagctgcacctggacaacaaccgcctcacaagtgtaccccaaggcctc
gccagcttgaagtacctacaggtggtgtacctccattccaacaacatacgtcaagtgggc
gtggatgacttctgtcccagaggattcggaatgaagaggacctactataatggcatcagc
ctgtttgacaaccctgtaaactactgggaagtgcagccagcaacgttccgctgtgtcaac
gaccggtttgccattcagtttggaaattacaagaaataa
DBGET
integrated database retrieval system
