Cyprinodon variegatus (sheepshead minnow): 107087050
Help
Entry
107087050 CDS
T06110
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107087050
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107087050
04261 Adrenergic signaling in cardiomyocytes
107087050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107087050
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107087050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
107087050
NCBI-ProteinID:
XP_015233879
Ensembl:
ENSCVAG00000009890
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MQVGRCCMGSSFSWFVWLLLLFSTLNIRVTGVTGTHQSIPPSVVKLWASAFGGEMKSISA
KYSGSQLLQKKYKEFERAVRVEEIDGLRLVKRLAKNMEEMFHKKAQAMKRLVEAAEEAHL
QHEEDPDLQYEYFNAVLINEVDEEGNNVELGGEFILQPNDHFNNLSVNLSLSVVQVPTNM
YNKDSAIVNGVYWSEALNKVFVDNFERDPSLIWQYFGSAKGFFRQYPGIKWKPDEHGVIA
FDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYN
EELHYVEPCLNGTLVQADVTNKDHFREHLDKLFAQGIGMLDIALTEAFNLLSDFNKTGRG
SECSKAIMLVTDGAVDTYDAIFEKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGYF
TQISTLADVQENVMEYLHVLSRPKVIDQEHDTVWTEAYIDSTLPQAQKMDDGQGPVLMTT
VAMPVFSTKNETRNRGILLGVVGTDVPVSELLKTIPKYKLGIHGYAFAITNNGYILTHPD
LRPLYGDGKKRRKPNYSSVDLSEVEWEDKDDTLRNAMVNRKTGTFSMEVTKSVDKGKRVL
VLHNDYYYTDIKGTPFSLGVALSRGHGKYFFRGNVTVEEGLHDLEHPDVALADEWTYCNT
DEHPEHRYLSQIDAIKIYLSGQEPRLHCDKELIQEVLFDAVVTAPLEAYWTSLVLNKSEN
SDKGVEIAYLGTRTGLSRINLFVVPDELTNQDFLTAEDKEGVFNADHFPLWYKRAAEQVP
GTFIYSLPFNSGSENRSVVLASTAIQLLDERKSPIAAAVGIQIKLEFFQRKFWTASRQCA
ALDGKCSISCDDENINCYLIDNNGFILVAEDYSLTGNFFGEAEGAVMNKLLQMGSFKRVT
LYDYQALCWVHSESSDSGHTLLDPYFAVFAALKWILTELVIFLVEFNLYSLWNVDVTAKA
QRAGPHMQVPCDTEYPAFVSERTIKENMGNIDCDGCIKSFVIQQIPSSNLFMVVVDNKCD
CSNFGPITMDPIEIMYNESLKCERLKMQKDRRRPDTCHPFHPEENSMECGRARSLTVSLT
AALLSSFLTLFLR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggtcggtgctgcatgggttccagcttttcttggtttgtctggctactctta
cttttctcaactctgaacatcagagttactggagtcacaggcacccatcaaagcatcccc
ccgtctgtggtgaagctctgggcctctgcgtttggtggggagatgaagtcaatctctgca
aagtactctggctcccagctgctccaaaagaaatacaaggaatttgagcgggcagtgagg
gtggaggagattgatgggctgcgactggtgaagagactagctaagaacatggaagaaatg
tttcacaagaaagcccaggctatgaagagattggtagaggcggcagaagaagcgcaccta
cagcatgaagaggatccagacctgcagtacgaatacttcaatgcagttctgatcaatgag
gttgatgaggaggggaacaatgtagagctgggaggagagtttatcctgcagcccaacgat
cattttaacaacctatcagtcaatctcagcctcagtgtggtccaggtgcccaccaacatg
tacaataaagactctgcgatcgtcaatggtgtgtactggtcagaggccctaaacaaggtg
tttgtggataactttgaaagggatccctcactaatatggcagtactttggcagtgctaag
ggatttttccgacaatatcctggaatcaaatggaagccagatgaacatggagttatagct
ttcgactgcagaaaccgaaaatggtacatccaggcagccacctctccaaaggatgttgtg
atcttggtggatgtcagtgggagcatgaaaggcctgagactgacgattgccaggcagact
gtttcctccattctagacactcttggagatgatgacttttttaatatcattgcttacaat
gaggaattgcattatgtggagccatgtctgaatggaaccctggttcaagcagatgtcacc
aacaaagatcatttccgggagcatcttgataagctgtttgctcaaggcattggtatgttg
gacatagctcttacggaggcgttcaatcttctcagtgattttaacaagaccgggaggggc
agtgagtgtagcaaggccattatgctggtgacagatggagcagtcgatacatatgatgct
atctttgagaagtataactggccagagagaaaggtccgaatatttccctacctcattggt
cgggagtctgcctttgcagataacttaaaatggatggcgtgtgctaacaaaggctatttc
actcaaatttctaccctggcggacgttcaagagaacgtaatggagtatctccatgttttg
agccgtcccaaggtcattgaccaggagcatgacacagtgtggactgaggcatacattgac
agcactcttccccaagcacaaaagatggatgatggtcaaggtccagtcttgatgacaact
gtagcaatgccagtgttcagcaccaagaacgagactagaaacagaggaatcctgcttggg
gtggttgggacagatgtacctgtctctgagctgctcaaaactattcccaaatataagctc
ggcattcacggctacgcctttgcaatcaccaacaatggctacatcctcacccacccagat
ctacggccactttatggagatggcaaaaagcgaagaaagccaaactacagcagtgtggat
ctctctgaagtggaatgggaggataaggatgacacgttgagaaatgccatggtcaacaga
aagacagggaccttctccatggaggtgacaaagagtgtggacaaagggaagcgtgtgctg
gttttacacaatgattattactacacagacattaaaggcactcctttcagtctaggagtt
gccctttccagagggcatgggaaatatttcttcagagggaatgtcacagtggaagaagga
cttcatgacctggagcatcctgatgtagcgctagctgatgaatggacatactgcaacaca
gacgagcatcctgaacatcgctacttgtcacaaatagatgcaataaaaatttatctgagt
ggccaggaaccccgcctgcattgtgacaaggaactgattcaggaagttctttttgatgct
gttgtaacagccccactggaggcctactggacaagtctggtgctcaataagtcagaaaac
tccgataaaggtgttgagattgcctatctgggaacaaggacaggactatctagaattaat
ctatttgtggtccccgacgaactcacaaaccaagactttttgacagcagaagacaaggag
ggggtgttcaatgccgatcactttccgttgtggtacaagagagcagcagagcaagttcct
ggaacctttatttattctctgcctttcaactcaggttcagaaaacaggagtgttgtactg
gccagtactgccattcagcttttggatgagaggaaatcccccatagctgcggctgttggc
atccagataaagttggagttttttcagagaaaattttggacagccagcagacagtgtgcc
gctttagatgggaaatgttccataagctgtgatgatgagaatattaactgctacctcatt
gacaacaatggcttcattcttgtagctgaggactattcactgactggaaatttttttggt
gaagcagaaggagctgtgatgaataagttgctgcagatgggctctttcaaacgggtcaca
ctgtatgactaccaggctctctgctgggtccattctgagagcagtgacagtggccacacg
ctgctggatccttactttgctgtttttgcagctttgaagtggatactgactgagcttgtc
atattcctggttgaattcaacttgtatagtttgtggaacgtcgatgtaacagctaaagct
cagagggcaggtccacatatgcaggtgccatgtgacacagagtacccagccttcgtctca
gaaagaacaatcaaagaaaacatgggcaacattgactgtgatggctgcatcaagtcattt
gtgattcagcagatccccagcagcaatcttttcatggtggtggtggacaacaagtgtgac
tgcagcaattttggacccatcaccatggaccccatagagattatgtataacgagtcgctt
aagtgtgagagactgaagatgcagaaagacagaaggcgaccagatacatgtcaccctttt
catccagaggagaactcaatggagtgtggcagggctaggagtctgaccgtttccctcact
gcagcactgctttcatcgttcctgaccttgttccttaggtga
DBGET
integrated database retrieval system
