Cyprinodon variegatus (sheepshead minnow): 107087054
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Entry
107087054 CDS
T06110
Name
(RefSeq) bile salt export pump-like
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107087054
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107087054
04147 Exosome [BR:
cvg04147
]
107087054
Transporters [BR:
cvg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
107087054
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107087054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
ABC_ATPase
AAA_29
AAA_15
AAA_30
AAA_21
Rad17
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
107087054
NCBI-ProteinID:
XP_015233888
Ensembl:
ENSCVAG00000010854
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MPAGSVRLQSIKKLGQDNHSYEVSGEEPAGSYMSMTNSKNTEKAQGNQDQPAIRVSFFQL
FRFSTCKDVVMMVVGSLCAVLHGSAQPLMLLVFGLLTDTFIEYDIELTELNDDRKECVNN
TIQWKRNYSAAADLSLPLNLSDLGLINSTLEMFTPLGNMSCGLLDIEHEMTMFAFYYVGI
GFSVFILGYVQISLWVTAAARQIQLIRKMYFSKVMRMEIGWFDCTSVGELNTRMSDDINK
INDAIADQVAIFIQRFTTFVCGFCVGFVKGWKLTLVIIAVSPLIGIGAGLMALFVAKLTG
MELQAYATAGAVADEVLSAIRTVAAFGGENKEVERYDKNLISAQRWGIRKGMIMGFFTGY
MWLIIFLCYALAFWYGSTLVIDTGEYTPGTLLQVFFGVLIAAMNLGQASPCLESFASGRG
AATIIFETIDREPEIDCLSEAGYKLDRVKGDIEFHNVTFHYPSRPEVKILDQLNVAVKSG
ETTAFVGPSGAGKSTAIQLIQRFYDPKVGMVTLDGHDIRGLNIQWLRSLIGIVEQEPVLF
ATTIAENIRYGRPGVSMEDIITAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIA
IARALVRNPRILLLDMATSALDNESEAIVQEALDKVRMGRTTISIAHRLSTIKNADVIVG
FEHGRAVERGKHNELLERKGVYFTLVTLQSQGDKALNEKARQMADEEEQEPERLNLARAG
SYRASLRASIRQRSRSQLSNLVPESSVPIAGDLAPRAFAMPQEDQVKKAIPEEDDDELVE
PAPVARILKYNAPEWPYMLFGSLGAAVNGGVNPVYALLFSQILATFAVTDPEAQRKEIDG
ICVFFVIVGVVSFFTQMLQGYAFAKSGELLTRRLRRIGFKAMLGQEIGWFDDHRNSPGAL
TTRLATDASQVQGATGSQIGMIVNSLTNIGVALIMSFYFSWKLTLLILCFLPFIALSGGF
QAKMLTGFAKQDKQAMESAGQVRKNIQNICLHVTRTQNNEREITTYLCFRVISAIVTSGT
ALGRASSYTPDYAKAKISAARFFQLLDRVPTISVYSNRGEKWDNFQGNLEFIDCKFTYPT
RPDIQVLNGLNVSVKPGQTLAFVGSSGCGKSTSVQLLERFYDPDHGKVLIDGHESTRVNV
PFLRSKIGIVSQEPVLFDCSIAENIKYGDNSREISMDEVISAAKKAQLHDFVMALPEKYN
TNVGSQGSQLSRGQKQRIAIARAIIRDPKILLLDEATSALDTESEKTVQEALDKAREGRT
CIVIAHRLSTIQNSDIIAVMSRGFVVEKGNHDQLMAMNGAYYKLVTTGAPIS
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgggatccgtaagactacaaagcatcaagaaactcggacaggataaccacagc
tatgaggtttccggcgaagaaccagctggctcttacatgtccatgacaaattctaagaac
acggagaaagctcaaggaaaccaagaccaacctgctattagagtcagcttcttccagctg
ttccgcttttccacctgcaaagatgttgtgatgatggtggtgggcagcctgtgtgcagtg
ctgcatggctcggcccagcccctcatgttgctggtgttcggcctgctcaccgacaccttc
atcgagtacgacatcgagctcaccgagctgaacgacgacaggaaggagtgcgtgaacaac
accatccagtggaagaggaactacagcgcagcagcagacctgagtctgcctctgaacctg
tcggacctgggtcttatcaactccacattagagatgttcactccactgggaaacatgtcg
tgtgggcttcttgacatcgaacacgaaatgaccatgtttgccttctattatgttgggata
ggattttctgtattcatactcggatacgttcagatctctctgtgggtgacagccgctgcc
aggcagattcagctcatcagaaaaatgtacttcagcaaagtgatgaggatggagatcggc
tggtttgactgcacctctgtgggggagctcaacactcgcatgtcagatgacataaacaag
atcaatgacgccattgcggaccaggtggccatatttatccagcgcttcaccacgtttgta
tgtggtttctgcgtcgggtttgtcaaagggtggaagctgacgctcgtcatcatcgctgtc
agtccactgattgggattggagcaggtctcatggctttgttcgtggctaaactgacagga
atggagctgcaggcctacgcgacagctggagctgtggctgacgaggtcctctccgccatc
agaactgtagccgcttttggaggagagaacaaggaagtagaaaggtatgacaagaacttg
atctcggctcagcgatgggggatcaggaagggtatgatcatgggttttttcaccggatac
atgtggctgatcatcttcctgtgctatgcactggccttctggtacggctctactcttgtc
atagacacaggggagtacactccgggaacactactgcaggtgtttttcggggtgctgatt
gcagccatgaatttgggacaagcctccccgtgtttggagtcatttgcatccggccgtgga
gccgcaaccataatatttgagactattgacagggagccagagattgactgtttatcagag
gctggatataagctggacagggtgaaaggagatattgaatttcacaacgtgaccttccac
tatccatccaggcctgaagttaagatcctggaccagctcaacgtcgctgtcaagtcgggt
gagaccaccgcctttgtggggccaagcggagcagggaaaagcactgccattcaactcatt
cagcgtttctacgaccctaaagtagggatggtgacactggatggtcatgacatcagaggc
ctgaacatccaatggctgcgctctctgattggcatcgtggagcaggaacctgtactgttt
gccaccaccattgcagagaacatacgctatggtcgacctggggtctctatggaggacatc
atcactgctgcgaaggaggccaacgcatacaacttcattatggaccttccacagaaattt
gacactttggtaggggaaggtgggggccagatgagcggtgggcagaaacagaggatagcc
attgctcgtgcgttggtcaggaacccacgcatcttactgctggacatggcgacctctgct
ctggacaatgaaagtgaagctattgtccaggaagctttggataaagtacgcatgggacgc
accaccatctcaattgctcaccgactgtccaccattaagaacgcagacgtgatagttggt
ttcgagcatggccgggcagtggagaggggcaaacacaacgaactgttggagaggaagggg
gtatacttcactctggtaaccctgcagagccaaggagacaaggctttgaatgagaaagcc
aggcaaatggctgatgaagaagaacaggagccagaacggttaaatctcgccagagcgggc
agctatcgtgccagtttaagagcctcaatccgccagagatctcgatcccagctttccaac
ctggtcccagaatcctcagtacctattgctggagatctcgcacccagagccttcgcaatg
ccccaagaagatcaagttaagaaagccataccagaagaggatgacgatgaacttgtagaa
cctgctccagttgccaggattctgaagtacaacgcgcctgagtggccttacatgcttttt
ggatctcttggggctgctgttaatggaggagttaacccagtttatgcactgctgttcagt
caaatcttggcgacgtttgctgtgacagaccctgaagctcaaaggaaagagattgatgga
atctgtgtgttctttgttattgttggagtcgtctctttcttcacccagatgctgcagggt
tatgcctttgccaagtctggagagctgctgacccgcaggttaaggcgaatcggtttcaaa
gccatgcttgggcaagaaattggttggtttgatgatcacaggaacagccctggggcgctc
accactcgtctggcaactgatgcttcgcaagtgcaaggggctacaggctcccagattggt
atgatcgtcaactctctgaccaacatcggcgtggccctcatcatgtccttctacttcagc
tggaagctcacactcctcatcctctgcttcctgccgttcatcgctctctcaggtggcttt
caggccaagatgctgacaggtttcgccaagcaggacaagcaggccatggaatctgctggg
caggtcagaaaaaacatacagaacatatgtctacatgtaactagaactcagaacaatgaa
agagaaataacaacctatctctgtttcagggtgatctcagcgatcgtcaccagcggcacc
gctttaggcagagcctcctcttacactccggattatgccaaggctaagatatcagcagca
cgtttcttccagctgctggaccgtgtgcctaccatcagcgtctacagcaacaggggagaa
aaatgggataacttccaagggaaccttgagttcatagattgcaagttcacttaccccact
aggcctgacatccaggtgctgaatggcttaaatgtttcagtaaagcctggacagacattg
gccttcgtgggcagcagtggctgtgggaagagcaccagtgtgcagctgctagagcggttc
tatgatcctgatcatggcaaagtgctgattgatgggcatgaatcaactcgcgtcaacgtg
cccttccttcgttccaagattggcattgtttcacaagagcctgtgctgtttgactgcagc
attgcggagaacattaagtatggagacaactcacgagaaatcagcatggacgaagtcatc
tcggctgccaagaaggcccagcttcatgactttgttatggcactcccagagaaatacaac
accaacgtgggctctcagggttctcagctgtctcgtggtcagaaacagcgcatcgccatt
gccagggcaatcatacgtgaccccaagatcctgctcctggatgaggcaacctccgccttg
gacacggagagcgagaagactgttcaagaagccctggacaaagccagagagggacggaca
tgcatcgtcatcgctcatcgcctatccaccattcagaactctgacatcatcgctgtcatg
tccaggggctttgtggttgagaaggggaaccatgaccagctcatggccatgaatggagct
tattacaagctggttacgacgggagcaccaatcagctaa
DBGET
integrated database retrieval system
