Cyprinodon variegatus (sheepshead minnow): 107087067
Help
Entry
107087067 CDS
T06110
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cvg01009
]
107087067
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvg00535
]
107087067
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
107087067
Protein phosphatases and associated proteins [BR:
cvg01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
107087067
Proteoglycans [BR:
cvg00535
]
Cell surface proteoglycans
Others
107087067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
Tc-R-P
PTP-SAK
DSPc
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Pur_ac_phosph_N
GUN4_N
Motif
Other DBs
NCBI-GeneID:
107087067
NCBI-ProteinID:
XP_015233907
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MRTDVCIWQLLLISHTVLAVEPVAQGVEQIPEDMNWSYSGSLNQQIWGKSYPSCNGARQS
PVDINEMFTQVRMQFQNLQLEGWHIPTSESTTIQNNGKTVSININGDFYVTGGGLSSRFL
VSRLSFHWGRCNASSAGSEHSLNGMKYPLEMQIYCYNPNEFQSLDDAIEKGGRVAALAVL
FEVSQEDNENFSPIVEAISGVSRFGKSGSVGAFTLRSLLPNITDKFYIYNGSLTTPPCSE
SVEWIVFKHTVAISDAQLEVFCDVMTMEQAGYVVLADYLQNNFREQQQFMGQVFASYTGE
EDVPTPTCSSEPQNVQADAQNDTTIVVTWERPRAVFDTTIDWYTVTYERLQGRDQIKQEY
RTDGDQDVGAIISSLLANSSYVVQVVAICTNGLKGRWSDQIIVDMPLEDPESDQPPDTVA
KEAESHREALDVAILKRPENKNNLDLASEDDIPEEEIPADQTRVYQIQPTQHQRQPTDQT
EANQQIPVQTGEQLTPKTPSESVDLQKAEPDEKVGEKTKSPNRMTPPGRSQNWIEDDQLI
PANPPFTRPNFDSTSAIWVNRITEEPGLLFPVARTTMAPPNRRHMTEEASLSVPPQYVGL
YPPQPTDQDLSEKEGENTPSKFDLSTPPMRDTQVTDIFYEDTVTSSPLEITNFPPTVSVP
VVPGTEVHRDSRINPEDRGSGVNKPLRKPISSFSATSNSEWITENVATAGNTLSDSLYKS
FTTSSLLRGLMHTTQPLFNANTPISRSEDSTAASDSSSHLTETTIKAMLSVHDGFSSASL
PLKTLPQSTNTSHLMFSEKNSLNPSPQDGEKQQIFTSSTYDDPLNTTNSVFLLSNNLSAI
AQLSKANQLEENSLNTSQIDSKQQEIAEFLGQLDKNEDGSSAETDGGDVYGHFNMSLLEL
RGLVLTEESGSGSGDDSSGESDTFSTFISSALSLSTDDTPGKGIVPERTISAARDEGGIS
RKRCKEKKNEISIEENEGKAKDEREIKVEGGSGAEDGSGSGEQAAVIGNLNLEQVGGDQE
PFKARPENKQTSQRNGKLQLTIYSQLTSRETAPTPDQARFMTSDENPYVGGHEEDREGGS
GYVTEDAFSNTAGSLHAAESSVSELGFTDNPQGKQEQTEEGSNSSHESRIGLVEGVEKDK
RTVVPLAVVSTLTALCLLVLVGILIYWRNCFQTANFYPDDPASPKVLSVPSTPLLLAADC
HEPLTIKQFVKHVLELHSTNTFSKEFEIVKESFEEVQACTVDMGITADSSNHPDNKSKNR
YINILAYDHSRVKLSNSLDKDGKCGDYINANYVDGYERTRAYIAAQGPLKASREDFWRMI
WQQNVGVIVMITNLKEKGRTKCDQYWPEENQEEYGSYQVTMRSTKTLAYYTLRTFSVRDT
ANKMPQKKVEHTVLHFHYTQWPDMGVPEYTLPVLSFIRASSQARTQEMGPVLVHCSAGVG
RTGTYIVIDSMMQQIQDQGTVNVLGFLKHVRTQRNFLVQTEEQYVFIHDALVEAILSRDT
SVTADLLHGYVSNLLIPSATGRTRMDKQFKLISQRQAKHADYSTALKDGNAERNRARALM
PVERSRVSLTASDTNSTGYINASYVMGHHCCREFIVSQTPLSSTVEDFWRMIWEHSTNTV
VCLQDSHSQNEKRDCSVYWPSKDLPMSFDGFTVSHTGEELVHLTNDEKLLVQDFTMQSTQ
NDCILLVRQFRPPCWPNPDSPIRNSFDLIGVVTERCRHTREPVVVHDPLGGVTSGLFCAL
TTLFNQLEEEGAVDVYMVARMTNLMRPGVFNDIEQYQYLYRAMLSLVSSQEDQRALQSPE
TNGSVPLGQSNTTESLESLM
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccgatgtttgcatctggcagctgcttctaatcagccacacagttctggcagtg
gaaccggtggcccaaggcgtggagcagatccctgaagatatgaactggtcctactcaggt
agcctgaaccagcagatctgggggaagagttacccgtcctgtaatggtgcccggcagtct
cccgtggacatcaatgagatgtttacccaagtcaggatgcagttccagaacctacagcta
gagggctggcacataccgacttcagagtctacaaccatccagaacaacgggaagacggtg
tccatcaatataaatggagacttctatgtaactggaggaggcctgagctccaggtttctt
gtatcgaggcttagcttccattgggggcgctgcaatgcatcatcagctgggtctgaacac
agcctcaacgggatgaaatatcctctggaaatgcagatctactgctacaatcccaatgag
tttcaaagtttagatgatgcaattgagaaaggaggaagagttgctgccttggctgttctc
tttgaggtaagccaggaggacaatgagaacttcagtcctattgtagaagccatcagtggt
gtgagcagatttggtaaaagtggatcagtgggggctttcaccctgaggtccctgctgccc
aacatcactgataagttctacatctataacggctcgctgaccactcctccctgctctgaa
tctgtggaatggatcgtctttaaacacaccgtggccatatcagatgctcagctggaggtt
ttttgtgatgtgatgaccatggagcaggccggatacgtggtgctcgccgattacctgcag
aacaacttcagggagcagcagcagtttatgggtcaggtctttgcctcctacacaggagag
gaggatgttcccacacccacgtgcagctcagagccacaaaacgtccaggctgacgctcag
aacgacaccaccatcgtggtgacgtgggagcgtccccgcgcggttttcgacaccaccatc
gactggtataccgtcacctacgagaggctgcagggcagagatcagatcaaacaggagtac
aggacagatggagaccaagatgtgggggccattatctccagtctgctggctaacagcagc
tacgtggttcaggtggtggctatctgcaccaatggcctcaaaggacgatggagcgatcag
attatagtcgacatgccgttagaagaccctgagagcgatcagccccctgacactgtagca
aaggaagctgaaagtcacagggaggctttagatgtagctatattgaagaggccagagaac
aagaataacctggatttggcttctgaagatgatattccagaggaggaaatcccagctgat
cagacaagagtttaccagatccaacctacccaacaccaaagacagcccacggatcaaaca
gaagcaaaccagcaaattccagtccagactggtgaacaattaaccccaaaaaccccatct
gaatctgtggatttacaaaaggctgaaccggatgagaaagtaggagagaaaaccaagagt
ccaaacaggatgacccctccaggtcgcagtcagaactggatagaggatgatcagctgatc
ccggcaaacccgccttttacaagaccaaactttgacagcaccagtgcaatttgggttaac
cggataaccgaggagccaggacttctgtttccggttgctcggacaacgatggcaccaccg
aatcgtcggcatatgacagaagaggcgtcgttgtcggttccacctcagtatgtgggtctg
tatccaccacagccaacagatcaagacctgtcagaaaaagaaggcgaaaataccccctct
aagtttgacctgtccacccctccaatgagggacacccaggtcacagatatcttctatgaa
gacacagtcaccagctctccactggaaatcaccaacttccctcctacagtatctgttcct
gtggtgcccggtactgaagtgcacagagactcccgaataaaccctgaagatcgaggatct
ggtgtaaacaaacctcttcgaaaacccatcagctcattttcagccacgtccaactcggaa
tggataacggagaatgtagcgacagcaggaaacaccctgtccgactcactctataaatcc
ttcaccacctcgtctttgctcagagggctgatgcacaccactcagcccctgttcaatgca
aataccccaatatccaggtctgaggattcaacggctgcttcagactcctccagccatctt
acagagacaaccataaaagccatgctctctgtccatgatggattcagttcagcatcttta
cccctgaaaactctccctcaatctaccaacacttcccatctcatgttctctgagaagaac
tcattaaacccttcgccccaggatggagaaaaacaacagatctttactagctcgacttat
gacgatcctcttaataccactaactctgtttttttactctctaataatctatccgctatt
gcccagctatcgaaagcaaaccagcttgaggaaaacagtttaaacacctctcagattgac
agcaagcaacaagaaattgctgaattcttagggcagttagataagaatgaagatggatct
agtgcagaaacagatgggggtgatgtttatggtcattttaacatgtctttacttgaatta
aggggtttggttttaacagaggagagtggatcaggctctggtgatgacagcagcggagaa
tctgatactttttccacatttataagttcagctttgagcttaagcacggatgatactcca
ggaaagggcatagtgccagaaaggacgatatctgctgcaagagatgaaggcgggatcagt
cgtaaaaggtgtaaagagaagaaaaatgagataagtattgaagaaaatgaaggcaaggcc
aaagatgaacgggaaatcaaggtagagggtgggagtggggctgaagatggcagtggttct
ggagaacaagcagctgttattggaaacttaaatctagagcaggttggtggtgatcaggaa
cccttcaaagctcgacctgaaaacaaacaaacgtctcagagaaatggaaaactccagcta
acaatctacagtcagctaacatctagggaaactgcacctacaccagaccaagcacgattt
atgaccagcgatgagaatccttacgttggcggtcatgaagaggaccgtgaaggaggatct
ggttatgttactgaagacgctttctcaaacacagctggttcccttcatgctgcagagagc
tctgtgtcagagctcggattcactgacaacccccaaggaaaacaggaacagaccgaagag
ggcagcaacagcagccatgagtcccggatcgggttggtcgaaggtgtggagaaggacaaa
aggacggtggtccctctggctgttgtctccactctcaccgctctttgtctgctggtacta
gtgggtatactcatctactggagaaactgtttccagactgctaacttctacccggatgac
cccgcatcacctaaagtcctctccgttccctccacgcccctgctgcttgctgcagattgc
cacgagccgctgactataaagcagtttgtcaagcatgtcctggagctccacagcaccaac
accttctccaaggagtttgagattgtgaaagagtcgtttgaggaggtgcaggcgtgtaca
gtcgacatgggcatcactgccgacagctcgaatcaccccgacaacaaaagcaagaaccgc
tacattaacatactggcctacgaccacagcagagtgaagctctccaacagtttggataaa
gatggaaaatgtggggactacattaacgctaactacgttgacggttatgagcgaacgagg
gcatacatcgcagctcagggccccctgaaagcaagcagagaggatttctggaggatgatc
tggcagcagaatgttggcgttattgtcatgatcaccaatctgaaggagaaaggacgcaca
aaatgcgaccagtattggccagaagagaaccaagaggaatacggttcctaccaagtgact
atgagaagcaccaagactctagcctactacacactgcggacgttctcagtcagggacaca
gcgaataagatgccacaaaagaaagttgaacacacagtcctgcatttccactacacccag
tggccagacatgggcgtcccagagtacaccctacctgtgctgtccttcatcagagcgtcg
tctcaggcccgaacgcaggagatgggccccgttctggtgcattgcagcgctggtgtggga
agaacaggaacctacattgtgattgacagcatgatgcagcaaattcaggatcagggaact
gtgaatgttttgggcttcctgaaacacgtccggacacagaggaacttcctggttcagacg
gaggagcagtacgttttcatccatgatgctctggtggaggccatcctcagccgggataca
tcggtcaccgcggaccttctccacggttacgtctctaatctcctcattccaagcgccaca
gggagaacgcgcatggacaaacagtttaagctgattagtcagcgtcaggctaagcatgca
gactacagcactgccctgaaggacggcaacgctgagagaaacagagcgagagcgctgatg
cctgttgagagatcgagggtttctctgacggcttcagacaccaactccaccggctacatc
aatgcctcctatgttatgggacaccactgctgtagagagttcatagtgagtcagactcct
ctgagcagcacagtggaagatttctggagaatgatctgggagcacagcaccaacacggtc
gtctgtctgcaggactcacacagtcagaatgaaaagagggattgcagcgtctactggccc
agtaaagacctgccgatgagctttgatggtttcaccgtgtcgcacacaggggaggagctt
gtccacctgaccaacgatgagaaacttcttgtgcaggattttacgatgcagtctactcag
aatgattgcatcttgctcgttcgtcagttcagacccccctgctggcctaatccagacagt
cccatcaggaacagttttgacctcatcggcgtggtcacagagcgctgcagacacacacgg
gaacctgtggtcgtacacgatcctttggggggagttacatcggggcttttctgcgctctc
accacccttttcaaccagttagaggaggagggagcggtggacgtctacatggtggcacgg
atgacaaacctcatgagacctggggtttttaatgacattgagcagtaccagtatctctat
agagccatgctgagcctggtgagcagccaggaggaccagagagccctgcagagtccagag
actaacgggtctgtaccactgggacagtccaacaccacagagagcctggagtcgctcatg
tag
DBGET
integrated database retrieval system
