KEGG   Cyprinodon variegatus (sheepshead minnow): 107087113
Entry
107087113         CDS       T06110                                 
Name
(RefSeq) la-related protein 1B-like
  KO
K18757  la-related protein 1
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107087113
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107087113
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 107087113
NCBI-ProteinID: XP_015233981
Ensembl: ENSCVAG00000005046
UniProt: A0A3Q2CFH4
LinkDB
Position
Unknown
AA seq 1078 aa
MSTEVECSQVDSGLTASSSGGVQDKSEGAHFHKEQENQGSEKQTDCHKPETNKSQGDSHK
KSKENDKENERSGDADSTVEKKVVEAPPPKVNPWTKRTTGRVPVGNINSSSPETDQQNAL
KVVRASKPRPRKPSKSSDFSDITNWPTPGELAKEQNVPSNDGKKTSSRRERDKRRERPDR
KSESSHDGGESKENKEAHLDPMEEPSKEGETKPGLDSKSSGLKKRGGEGNKRKWVSLPLE
DVSRDDADKTSGGCAAQSDTEPISDSSDPTAPNQMVHDNRAHYDSRSWRAEPRDHGDDGG
SIRSDGGAGRGGLRGRGKGRGRGRGRGRGRYEYSLSYRDSHSSDGSVQVPADFSSSIVYY
YDDGNKVQMYTVDEKLLKEYIKRQIEYYFSIHNLERDFFLRRKMDAQGFLPISLIAGFHR
VQALTTDVNLIMEALKSSTEVELVDDKIRCKVEPDRWPIPGPSVVGSPRTDFSQLINCPE
FVPRQNLNAPTAATLPVNEPLLDSTQLQESGEPAPSNQDSNSASDNSKDTPKSDPKPDPD
AWIQVEKRHRQTSGKSKGESKATAPSSQPPAQAELDQEELDFMFDEEMEQMAPRKNKFTD
WSDDDDSDYELDDQDVNKILIVTQTPPYVRKHPGGDRTGNHESRAKITADLAKAINDGLY
YYEQDLWKGEELIECSKQDVENFKKLNVISKDEFDTLTPKVPVDSNQEVPALPMPVDSGA
DLARSLPATVPESPSTSQPRTPRTPRTPGRQDPNKAPRFYPVMKESGAIDGQMPRKKKTR
HSSNPPQEAHIGWVMDSREHRPRSASISSSNASPSEGAPLSGNYGCTPQSLPKFWHPSHE
LLRDNGFTQQGYHKYRRRCLNERKRLGVGQSQEMNTLFRFWSFFLRDNFNRKMYEEFKQF
ALEDAKENYRYGLECLFRYYSYGLERRFKLDLFKDFQEETLRDFEKGQLYGLEKFWAFLK
YSKIKNQPIDPKLQEHLSKFKNLEDFRVMPPIGEEGGRKRYPSSSAGDDGRRRRHPSNST
SKPTQASKSSNAPSQAAASSSAQNSAKDGPKKTAAPSTNPGKKSDSRAVKKDGVSPNK
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgtccactgaggttgagtgtagccaagttgactcgggtttgacagcgagcagctccggc
ggggtgcaggacaagtcggagggggctcatttccacaaagaacaagagaatcaaggttcg
gaaaaacagactgactgccacaaacccgagacgaacaagagccagggggacagccataag
aaaagcaaagaaaacgataaagagaatgaacggagcggtgacgctgactcgaccgttgag
aagaaagttgttgaagctcctccaccgaaagttaacccttggacaaaaagaaccacgggc
agagtaccggtcggtaacatcaactccagctcccctgagacagatcagcaaaatgccttg
aaagttgtccgagcaagtaaacccagaccgagaaaacccagcaagtctagtgacttcagc
gatataacaaactggcccactcctggagaactcgcaaaagagcaaaatgtccccagcaac
gatggaaagaaaacgtcttcccgcagagaaagggacaagaggagagagcgaccagacaga
aaatcagagagcagtcatgatggaggtgagagcaaggagaacaaggaggctcatctagac
ccaatggaggaaccctctaaagaaggagaaaccaaaccagggctggattcaaagagctcc
ggcctgaagaagagaggaggtgagggtaacaaacgtaagtgggtttctctgccgctggag
gacgtctcccgggatgacgcagacaagacatctggtgggtgcgctgctcagtcagacacc
gagcccatcagcgactcgtctgatcccacggcgcccaatcaaatggttcatgataacaga
gcgcattatgacagccggagttggagagccgagccacgggaccacggagacgatggcggc
agcattcggagcgatggcggcgctggccgtggtggacttcgaggcagggggaaaggacgt
ggacgtgggagaggtcgtggacgaggtcggtacgaatactctctgagttacagagactct
cactcatctgacggctcagttcaggtccctgcagacttcagtagcagcatagtttactac
tacgatgatggcaacaaggtccagatgtatacagtggatgaaaagcttcttaaggaatac
atcaagaggcaaattgaatactacttcagcatccacaacctggagcgggatttcttcctc
aggaggaaaatggatgcacagggcttccttcccatttctctcattgctggcttccacaga
gttcaggctcttaccactgatgtcaacctcattatggaggctttaaaaagcagcacagaa
gtggagctggtggacgacaagatccgctgtaaagtagagccagaccgctggcccatcccc
ggcccttctgtcgtgggttcccctcgcaccgacttctcccagctcatcaactgccctgaa
tttgttcctcgacagaacctcaatgcacccactgctgccaccttgcctgtaaatgagccg
ctactggactcaacgcagctacaggaatcaggtgaacccgccccctccaaccaggactct
aactcggcctcggacaactccaaagacacccccaagtctgaccccaaaccagaccctgac
gcctggatccaagtggagaaacggcaccgtcagacctccggaaaatcaaagggagaatcc
aaagccactgctccgagcagtcagcctcctgctcaggctgagctggaccaggaggagctg
gacttcatgttcgatgaggaaatggagcagatggcgcccaggaaaaacaaattcaccgac
tggtcagatgatgatgactcagactacgagctggacgaccaagatgtcaacaagatcctg
attgtcacccagactcctccttacgttcgcaaacaccctggtggtgatcgcacaggaaac
cacgaatcccgagccaagatcaccgctgatctggctaaagcaatcaacgacgggctgtac
tactacgaacaggacctgtggaagggagaggagctgatcgagtgtagcaagcaggatgtg
gagaacttcaagaagctgaatgtcatcagtaaagatgagtttgacaccctcactcccaaa
gtgcctgttgactcaaaccaggaagtcccagctcttcccatgccagtggacagcggagca
gatttggctcgctctcttcctgcaacagttcccgagtcccccagcacttctcaacctcgg
acccccagaacaccgcgcacgcctggacgccaggatcccaacaaggctccacgcttttac
ccggttatgaaggagagtggcgccattgatggacagatgccgagaaagaagaagacccgc
cacagctccaacccccctcaggaggcccacatcggatgggtgatggattcccgtgagcac
cgaccgcgctccgcctccatcagcagctccaacgcttctccatcagaaggagctccactg
tcaggaaactacggctgcactccccagtctctgcctaagttctggcatccatcgcatgag
ctgctgagagacaacggcttcactcagcagggatatcacaagtaccgccgaaggtgcctt
aatgagagaaaacggttgggagtgggccagtctcaggagatgaacactctgttcaggttc
tggtccttctttctcagggacaacttcaacagaaagatgtatgaggagttcaaacagttt
gcacttgaagatgccaaagaaaattacaggtatggattggaatgcctcttcagatactac
agttatggtttggagaggagattcaagctggatctgttcaaagactttcaggaggagacc
ctgagggactttgagaaaggtcagctatatggactggaaaagttctgggccttcctgaag
tattcaaagataaagaaccaacctattgacccaaagctgcaggagcacctctcaaagttc
aagaacctggaggatttcagggtgatgcctcccataggagaagagggtggcaggaagaga
tatccctcgtcctcggccggggatgatggaaggcgccgcagacatccttccaactctacc
tcaaagcctacgcaggcctctaaatcctccaatgctccttctcaggctgctgcctcctcc
tccgcacagaattcagccaaagacggccccaagaaaacagcggcgccatcaactaacccc
ggcaaaaagtccgacagcagagcggtgaaaaaggatggagtttcacccaacaaatga

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