Cyprinodon variegatus (sheepshead minnow): 107087218
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Entry
107087218 CDS
T06110
Symbol
ssx2ip
Name
(RefSeq) afadin- and alpha-actinin-binding protein isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04517
IgSF CAM signaling
cvg04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107087218 (ssx2ip)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107087218 (ssx2ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107087218 (ssx2ip)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
107087218 (ssx2ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
EsxC
DUF5830
Motif
Other DBs
NCBI-GeneID:
107087218
NCBI-ProteinID:
XP_015234149
Ensembl:
ENSCVAG00000003092
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MPDSSQVKDARRCSVECGTPPLRHFSQSSLALPRNSQSLRTFCTEHNMQECLSYIKQEVS
LLSLSPFWTELDDDSQLNVVAVLNCMYDLIQLHHRSLRTLENMEMEQLKLSSYVDNLKTN
NTHLKEEVELSKRQNTGLLERERQLHLKLKSLQSSLKNEKDEVQKLQNITSSRACQYNHE
MKRRERELNKLRERLNQLLADKKERKQTIDLLNNLGRADGKRSLWKTEKTEAKHEEEMYR
TLLSDYELRQRELALENKELRKVMQQIKKEMVSILKSRKLALKEEKQELNGMQTASDDEE
NEVFDSSKESLELFCIHAREKLTNSIRLQWRRLKSHVEKLDSQGVDDVSREEKEEMDRLK
LEIQQCKDFIQTQQHLLQRQLSSPIDQDSASLQNDGLMLQEKMRLSEEWKSLEEQRRIFE
RERRNYTEAAIRLSHERKIFEEDRALWLKQQFLSMSPFGNSNQPHLLKSASALLITETEV
GSLNASEMPHECQSVLVSQKSRSVSLTSSSTDDLESALCLIPENGSSEHRKSELFGDFNS
LHENVPLRRKQWKESKDLSSHSLSEENSTA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccagactcctctcaagtcaaggatgctcgccgctgctctgttgaatgtggaacacct
cccttgaggcacttcagccagtcatcgctggcacttcccagaaactcccaaagtcttaga
accttctgcacagagcacaatatgcaggaatgtctgtcttatatcaaacaggaggtgtca
ttgctgagcctctcgcctttttggaccgagttagatgacgactcacagctgaatgtagtg
gctgtgctgaactgcatgtatgacctgattcagttgcaccacaggagtctgagaacactg
gagaatatggaaatggaacagcttaaactcagcagctatgtggataacctgaagactaat
aacactcatctaaaggaagaggttgagctctctaaacgacaaaacacaggcctgctcgaa
agagaacgacagctgcacctgaaactaaagagtctgcagagctccctgaaaaatgaaaaa
gatgaggtgcaaaaactccagaacatcacctcaagccgtgcctgtcagtacaatcacgaa
atgaaaaggagggagagagaactgaacaaactgagggaacgactgaaccaactcctggct
gacaaaaaggagaggaaacaaaccattgacttactaaacaaccttggaagagctgatgga
aagagaagcctgtggaaaaccgaaaagacagaagcaaagcatgaggaggagatgtatagg
actcttctgagtgactacgaactgaggcagagggagcttgctctggaaaacaaagagtta
aggaaggtgatgcagcagataaagaaagagatggtgtccatcctgaagtcaagaaaactg
gccctgaaagaagaaaagcaggaacttaatggcatgcagactgcctcagacgacgaagag
aacgaggtgtttgactccagcaaggaaagccttgagctgttctgtattcatgccagggaa
aaactgaccaacagtattcgcctacagtggagaagattgaaaagtcacgttgaaaaacta
gacagtcaaggtgttgatgatgtctctcgtgaagagaaggaggagatggacagactaaag
ctggagattcagcagtgcaaagacttcattcaaacacagcagcatctcctacagaggcag
ctgagctccccgattgatcaagactcagcctcactgcagaatgatggcctcatgctgcag
gagaagatgcgccttagtgaagaatggaagagcttagaggaacagagacgcatctttgag
agggaaaggaggaactatactgaagcagctattagactaagccatgagaggaagatcttt
gaggaggatcgtgcactatggctcaaacagcagtttctcagtatgagtccctttggaaac
tcaaaccaacctcatctgctgaagtctgcaagtgctttattgataactgaaactgaagtt
ggttcactaaacgcttcagaaatgccccacgaatgtcaatcagtcttggtctctcagaag
tccagatctgtctctctcacatcatcttccactgatgacttggagtctgctctttgtctt
attccagaaaatggctcatcagaacacagaaaatctgaactgtttggggatttcaactca
ctccatgaaaatgttcctctgcggcgcaaacagtggaaggagagcaaagacctcagcagc
cattcactctcagaggagaacagcactgcatga
DBGET
integrated database retrieval system
