KEGG   Cyprinodon variegatus (sheepshead minnow): 107087282
Entry
107087282         CDS       T06110                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cvg04121]
    107087282
   03400 DNA repair and recombination proteins [BR:cvg03400]
    107087282
Ubiquitin system [BR:cvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    107087282
DNA repair and recombination proteins [BR:cvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     107087282
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A GIP1_N UBA_4 UBA Methyltransf_32
Other DBs
NCBI-GeneID: 107087282
NCBI-ProteinID: XP_015234266
Ensembl: ENSCVAG00000002009
UniProt: A0A3Q2DM80
LinkDB
Position
Unknown
AA seq 1169 aa
MMTSVVSNPARGTRDKTLPTTTQTTQPQKQIQATAEQIRLAQMIYDNNDADFEDKVKQLI
EVTGKTQDECVVALHDCNEDVNRAINFLLESTSDTTSWETVGKKRSIGKEGGSSDLKESR
EKKGDREASRGRGVSNRRSRGISRGREGRSEENGFEMTPVERGADRGRRGRGRGVGGRGR
GRGAVGNRFSSQGMGTFNPADYTPNSRGNQDRLEGNETAEGTGTWRANLEEWTSEEWNED
LSETKVFTASSAPANHITAGHNVDLASILPKTGVSVGGSVDSDLGAIVDGPSAEDLGQSL
VFTNSHHNGRTATHSYAHATANSYAHAASASTTYAHAALSSVIGSGFGSLNAPKQGPAAD
VGMSETLNGPRLPQRTSQMLATGSGGVSKDPGQPPIQSPASASSPTADTKSLRVENGPIL
SQNLEMKHQPEPSAVLSQLAQRQQQSSMVPTTEPPGLSQSHAPQAPTPPGQESSGLPVRD
GSSPGSKLPGLELSATDPPQRQLKTQRRRAPLPSKIPASAVEMPGSADISGLNVQFGALD
FGSESGSVTADSKTELAREHTSTLAQATMPSPAAVPTQAQSIMFPKSGPVSDHMSSLPSA
ISDANFPSPSLGLPGATPSPSIGLPSAAAPQPSSVPTATSRVESSGSRTLPPHLGFSQSK
EVPSGGSAPLTNGYSVMKTQTTQESASSSRTVKTESPVMTSDGGSGHHIPSPVVTPSNSA
PISSLSSHINSTHSSGTPLVTSSSLTITNEESGNSSSLHAFSSSSQIVTPSAPTIVSSSS
SNGLYQSGGPGLAQNGANTTISAAGSRNTTQLTTTSGKAPPNLAQGVPPLLANQYIMGPG
GLLPAYPQIYGYEDLQMLQSRLPLDYYGVTFPGATAPIPGRDSLANNPYSGEATKFGRND
SSSPAPPTSLSTAGVQSQPQQTQQTGTQGQGQGQNQGQQTQNQAFLNPPLPPGYGYTGLP
YYAGMPGVPSAFQYGPTVFVPPASAKQPAMGLANPSSQYHQQHQPSYGQHAYGAAFDDLS
QAHAGEYSKTGYGGSAQSQAKSAGSGPGKAPGLSGSGTGGGVPDMGGSIYNKTQSFDKQG
FHTGTPPPFNLPSALGGTGPMNPGGAPGYAPAPFLHILPPHQQPHSQLLHHHLTQDGQGG
PGQRNQSSSMQQKTQGSKSSYGSSPYWAN
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgatgacttctgtggtcagcaatccagctcgagggactcgggataagacactgcccaca
accacccaaacaacacagccacaaaaacagatacaggctacagctgagcagatacgttta
gctcagatgatctatgacaacaatgatgctgactttgaagacaaggtcaaacagttgatc
gaggtaactggaaagacccaagatgaatgcgtagttgcccttcatgactgcaatgaagat
gtaaacagggccatcaattttctgcttgagagcacctccgacacaacctcctgggagact
gtgggaaagaagcgtagtattggtaaagagggaggaagctcagatttaaaagagagccgt
gagaagaagggagatcgtgaggccagccgtggacgtggagtgtccaacaggagaagcaga
ggaatcagccgtggtcgtgaaggtcgttcagaggaaaatgggtttgaaatgactcctgtt
gagagaggggctgaccgtgggcgccggggtcggggcagaggagttgggggtcgtggaaga
ggaaggggagctgtcggaaacaggttttcttcacaaggaatgggaacttttaatcctgct
gactacaccccgaactccaggggaaaccaggacagattggaggggaatgaaactgctgag
ggtactggaacatggcgtgccaatctggaagagtggacttcagaagaatggaatgaggat
ttgtctgagaccaaagtgttcactgcctcttcagctccagccaaccacatcacagctgga
cacaatgtggacctggctagcatactgcctaaaactggagtgagtgtaggaggttctgtg
gactctgacttgggagcaattgttgatggtccttcagcagaggatttgggccaaagcctg
gtgttcaccaactcccaccacaatggacgaactgcaacacacagctacgcacatgccaca
gccaacagctacgctcatgccgcctctgctagcaccacatatgcacatgcagcactgtct
tcagtcataggttctggttttggctccctgaatgcacctaagcagggaccagctgcggac
gttggcatgtctgagacacttaatgggccccggctgcctcagagaaccagtcagatgttg
gcaactggcagcggcggtgtctccaaagacccaggacagcctccaatacagagtccagct
tctgcttcctcacctactgcagatacgaagtctctgagggtggaaaatggcccaattcta
tcccaaaacttggaaatgaaacatcagccagaaccgtctgcagtgctcagccagcttgct
cagaggcagcagcagtcctccatggtgcccaccacagaacccccaggcctgtctcagtca
cacgcaccacaggcccccacaccaccaggtcaagagtcctctggcctccctgtaagagac
ggatcttctccaggaagcaagctgccgggcctggagctttcagccactgatccccctcag
cgacagttaaagactcagcgacgcagagctccccttccatcaaagattccagcttcagca
gtggaaatgcccggctcagcagacatctctggtctgaatgttcagtttggagctcttgac
tttggatctgaatctggcagtgtaacagcagactctaagacagagttggcccgtgagcat
acgtccaccttggctcaggcaaccatgccttctcctgcagctgttcccacacaagcacag
agcatcatgttccccaagtcaggacccgttagtgaccacatgagcagcttgccttcagcc
atatcagatgccaactttccttccccttctttgggcctgcctggtgctactccctcccct
tcaattggtctccccagtgcagcagctccacagccctcttccgtcccaactgcaaccagc
cgagtggagagcagtggctcgagaactttgcctcctcatcttggcttctcacagagcaaa
gaggtcccatcaggtggttctgctcctctaactaatggctacagtgtcatgaagacacag
actacacaagaaagtgcttcatcatctagaacagtgaaaacagaatctcctgttatgaca
agtgatggtggatctggacaccatattccttctcctgtagtcacaccatccaactctgct
ccaatctcatccctcagcagtcacataaacagtactcactcatccggaacacctcttgtc
acaagttcttccctcacgataaccaatgaggaaagtggcaacagcagcagtcttcatgca
ttttcatcatcgagccaaattgtcactcctagtgcgcctacgatcgtcagtagttcatcc
tccaatggtctttaccaatcaggaggaccaggactggctcagaatggtgcaaacaccaca
atctcagctgcaggcagccgcaacaccacacaactcaccacaacttctggtaaagctcct
cctaatttagcccaaggagtgcctccacttctggccaaccagtacattatgggtcctggt
ggcttgcttcctgcttacccgcaaatctatggatatgaagacttgcaaatgctgcagtct
cgactacctttggattactatggtgttacattccctggtgctacagctccaatccctggt
agagacagtttagctaataatccatattctggtgaggcaacgaagtttggcaggaatgac
tcttcttccccagcccccccgaccagcctgtctacagcaggagtgcagtcgcagccccaa
cagacccagcagacagggactcaaggacagggacagggtcagaaccagggtcagcagaca
cagaaccaggccttcctcaacccccctctgccacctggctacggatacactggtctgccg
tactatgctggcatgcctggtgttccttcagccttccagtatggccccaccgtgtttgtg
cctccagcttctgccaagcagcctgccatgggcttggccaacccctccagtcagtaccac
caacagcatcagccaagttatgggcagcatgcctacggtgcagcttttgatgacctgtcc
caagcccatgctggggaatacagtaagacagggtatggcggctctgcccagtcacaggca
aaatcagcaggcagcggcccagggaaagcacctggattatctggatcaggaactggtggt
ggagttcctgacatgggtggttcgatatacaacaaaacacagtcgtttgacaagcaaggc
ttccatacaggaactccacctcctttcaatctgccctcagcactgggagggacgggcccc
atgaatcctggtggagctcctggctacgctccagctcctttcctgcacatcctgcctcca
caccaacagccccactcccagctgctgcaccatcacttaacacaagacggacagggtggt
ccaggtcagcgcaatcagtccagcagtatgcagcagaaaacccaaggcagcaagtccagc
tacggcagctctccctactgggcaaactga

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