Cyprinodon variegatus (sheepshead minnow): 107087366
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Entry
107087366 CDS
T06110
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107087366 (ttf2)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107087366 (ttf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Pep_deformylase
Motif
Other DBs
NCBI-GeneID:
107087366
NCBI-ProteinID:
XP_015234393
Ensembl:
ENSCVAG00000000795
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MDKVKCDVHGTVCMLKTGVRDGPNKGKSFYICIDKQGCDFTQQASVPPSHCLCHEDSVVE
LQAISFSQQQQSHRLYYRCAVGKRTGQRWCGNVPWTAAEKDRRSPLTDSQLQPSCIPHVR
NPFKAPGMTEKTSDWRNSQSVGREGKDGEKKTVTEIHNAEGKQGSHKENVEASGSSETYR
GKLLPPGLKLKKRVSSEESSNSKAEGDDKAAERIRGSSEKDSAEELKEEKTISTPEITVD
VNRSQKISQTGPDLQRNKPQKEDESRSVSQVEPVAENAGSAPNSSKASREAVPAAVKPHK
TEARQDEDDDVVPVSVKPASQKTPPASAVQKTITSFPGFQPAAADPKGMQRLLSAQLQQK
KATLSAVNVAALPDKGERLRIQVKELEDALESLSLTAASQQESVDEPKSSGSAAGRPAVN
PFNRQGGTMLLPSPPVPGPVQHQASGSCSGIQLSQGNIQMFADLQMHSYYGGRMTNERLL
AVKNATCEAIDHLHKSLESCPDAEQEASDPRGIKVSLLAHQRRALAWLLWRETQNPCGGI
LADDMGLGKTLTMISLILKKKIEAKKEDDEKEGKKLDCWVSKSDSTVVVSKATLVICPAS
LIHHWKKEIERHVKTGRMSVYLYHGPSREKSARALADYDVVVTTYGLVNKEIPVQKEDAD
NPSKDPDQMPSGSSPLLRVSWARVVLDEAHNIKNPKVQTSMAVCQLRARARWAVTGTPIQ
NNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSNRGRERLNILTRTLLLRRTKNQLDSMGK
PLVDLPNRTCEVHELKLSEDEQAVYDVVFAQSRSTLQNYLKRHEGKDLDKGKTSSVNPFD
KVAQEFGLSQPDPAVSSSQQASSTVHILSLLLRLRQCCCHLSLLKKTLDSSELQGDGIVL
SLEEQLNALSLSSTPSQSGPDPNDTVALNGTRFPSKLFEETSKSTKISAITSELMTITEK
GDNQKSVIVSQWTSMLSIIAVHLRQMGLTYGVIDGSVNPKRRMELVEEFNTNPKGPQVML
VSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQRKDVTIHRFVCEGTVEEK
ITTLQTKKKELAQNVLSGTGSTVSKLSLADLKIIFGV
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagttaaatgtgacgttcacggcaccgtatgtatgttaaaaaccggcgtgaga
gatgggccaaataagggcaagagcttttacatttgcattgacaagcagggctgtgatttc
actcagcaggccagtgtcccgccatcgcactgtctgtgtcacgaagattcagtggtggag
ctccaggccatcagcttcagtcaacagcagcagagccaccgactgtactacagatgtgct
gttggaaaaaggacagggcagagatggtgtggaaatgtgccttggactgctgcagaaaaa
gatagaagaagccctctaaccgactcccagctgcagccctcttgtattccacacgtcaga
aatccttttaaggctcccggcatgacggaaaaaacctcagactggagaaacagtcagagt
gtcgggcgtgaagggaaagatggagagaagaaaactgttacagagattcataatgctgaa
ggaaaacaaggttcccataaggaaaatgtggaggcttccggctcatctgaaacatatcga
ggtaaactgcttccccctggattgaagctgaagaagagggtttcaagcgaggaaagcagc
aactccaaagctgagggcgatgataaagcagcagagaggatacgaggcagcagtgagaaa
gattcagccgaggagttaaaagaagaaaaaacaatttctactcctgaaattaccgtcgat
gtcaatcgatctcagaagatcagtcaaactggcccagatctccagagaaacaaaccacag
aaagaagacgaaagccgctcagtgagtcaggttgaacctgtagcagagaatgcagggtct
gcacccaatagcagcaaagcttccagagaagccgtcccggctgccgtcaaaccccataaa
acagaagcccgtcaagatgaggacgatgatgtggtgccggtttcagtgaaaccggcatct
cagaagactcctccggcttctgctgtccaaaagaccatcaccagcttccctgggtttcag
ccggctgccgctgatcctaaagggatgcagcgcctcctgagtgcgcagctccagcagaag
aaggccactctgtctgctgtgaatgtggcggccctgccagataaaggagagaggctgagg
attcaggttaaagaactggaggacgctctggagtccctgagcctcactgctgcctctcag
caagagtctgttgatgagcctaagagcagcggttctgctgctggtcggcctgcagtgaat
ccattcaacaggcagggtggtaccatgctgctcccctcccctcctgtaccgggcccagtc
cagcaccaagcctcaggcagctgctcagggattcagctaagccagggaaacatccaaatg
tttgcagatcttcagatgcattcctattatggcggcaggatgacgaatgagcgtctgctg
gcagtgaaaaacgccacctgtgaggccatcgaccatcttcataaatccctggagtcctgc
ccggatgctgagcaggaggcctcagaccccagaggcatcaaggtgtcactattggcccat
caaaggagagctttggcctggctgctctggagggaaactcagaacccatgtggaggaatt
ctggcggatgacatgggcttggggaaaactctcaccatgatttctctcatcctgaaaaag
aagattgaggctaaaaaggaagatgacgaaaaggaagggaagaagctggactgctgggtg
tctaaaagtgattccaccgttgtcgtctctaaagccactctggtcatctgtcctgcctct
ctgattcatcactggaagaaggaaattgaacgacatgtgaagacgggcaggatgtctgtg
tatctgtaccacggacccagccgcgagaaaagcgccagagcattagcagattacgatgtg
gtggtgaccacatacggtttggtcaataaggagattccagtccagaaggaggacgctgat
aaccccagcaaagatcctgatcagatgccttcaggttcctcacctcttctgcgagtatcc
tgggcccgtgtggttctggatgaagcccacaacattaaaaatcccaaagtgcagacctcc
atggccgtgtgtcagctaagagcccgcgcacgctgggccgtcaccgggacccccatccag
aacaacctgctggacatgtactcactgctcaagttcctgcgttgttcccctttcgatgag
tacaagctctggaaagctcaggtggacaacggctccaacaggggccgagagagactcaac
atcctgacgaggactctgctgctgagacggactaaaaatcagctcgactcgatgggaaaa
ccactggtggatcttcctaaccggacctgtgaagtacatgagctcaaactctctgaggac
gagcaggccgtatatgacgtggtgttcgctcagtccagatctactctgcaaaactatctg
aagagacatgaagggaaggatttggacaagggaaaaacttccagtgtcaatccgtttgat
aaagtggcccaggagttcggtttatcccagcctgatcccgcagtgtccagctctcagcag
gcatccagcactgttcacatcctctcactgctgctacgtctcagacagtgctgctgccac
ctgtcgcttcttaagaagacattggactcatcggagctgcagggtgatgggatcgttctg
tcgctggaggagcagctgaacgccctgtccctctcttcaacgccctctcagtcaggccct
gaccccaatgacactgtagccttgaacggcacgcggttcccctccaagctgtttgaggag
accagtaaaagcaccaagatttctgccatcacttctgagctcatgacgataacagagaag
ggcgacaatcagaaaagcgtgatcgtgtcgcagtggaccagcatgctcagcatcatagca
gttcatctgcggcagatgggcctgacttacggggtcattgacggctcggtgaaccccaaa
cggcgcatggagttggtggaagagtttaacacaaaccctaaaggaccgcaggttatgctc
gtttctctgtgtgctggtggagttggactcaatcttatcggaggaaatcatctcttcctc
atagatatgcattggaacccagccttggaggatcaggcctgtgaccggatctatagagtc
ggacaacgtaaagatgtcaccattcacaggtttgtgtgtgaaggaacagtggaggaaaaa
attaccaccctgcagacaaagaagaaagagctggcccagaatgtgctttcaggaacagga
agcaccgtctccaaactctccttggctgatctcaaaatcatttttggtgtttga
DBGET
integrated database retrieval system
