Cyprinodon variegatus (sheepshead minnow): 107087378
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Entry
107087378 CDS
T06110
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04260
Cardiac muscle contraction
cvg04261
Adrenergic signaling in cardiomyocytes
cvg04814
Motor proteins
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107087378 (tpm1)
04820 Cytoskeleton in muscle cells
107087378 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107087378 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
107087378 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107087378 (tpm1)
04147 Exosome [BR:
cvg04147
]
107087378 (tpm1)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
107087378 (tpm1)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of microglial cells
107087378 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CCDC39
CLZ
Rod_CreS
Sec2p
DUF745
TMF_DNA_bd
DUF3450
CENP-F_leu_zip
FKBP15
ATG16
ERM_helical
Lebercilin
PUMA_CC
CC_Bre1
HAUS1
Laminin_I
SlyX
DUF1664
DUF16
TMP_N
XhlA
Motif
Other DBs
NCBI-GeneID:
107087378
NCBI-ProteinID:
XP_015234408
Ensembl:
ENSCVAG00000016308
UniProt:
A0A3Q2D5X8
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELSESKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcagctgaggacagaagcaaacagcttgag
gacgacttggtggctctgcaaaagaagctgaagggaactgaggatgagctggacaagtac
tccgaggctcttaaagatgcccaggagaagcttgagcttgctgagaagaaagccaccgat
gctgagggagacgtagcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctggccacagccctgcagaagcttgaggaggctgagaaggctgca
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggatgaggagaag
atggagatccaagagatccagctgaaagaggccaaacacattgctgaggaggcagatcgc
aaatatgaggaggtcgcccgtaaactggtcatcattgagggtgacctggaacgtacagag
gagcgtgctgagctgtcagaaagcaaatgctctgaacttgaggaagagctgaaaactgtg
accaacaacctgaagtcactggaggcccaggcagagaagtactcacagaaggaagacaag
tatgaggaagagatcaaggtcctcactgacaagctgaaggaggctgagactcgtgctgag
tttgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tactcccagaaactgaagtacaaagccatcagcgaggagctggaccatgccctcaacgac
atgacttccatataa
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