Cyprinodon variegatus (sheepshead minnow): 107087383
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Entry
107087383 CDS
T06110
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107087383 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cvg03310
]
107087383 (rora)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107087383 (rora)
Nuclear receptors [BR:
cvg03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
107087383 (rora)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107087383
NCBI-ProteinID:
XP_015234430
Ensembl:
ENSCVAG00000016520
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MESPPDPASDPGNSASEPATPVRETPVNLETLRKAEHPAPVRKQSCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccgaaaagcggagcatccagccccg
gttcggaagcagagctgctccagcaccaacagaggtatctcagtcacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcaaagcaat
gcagcgtactcctgccctcgtcagaaaaactgcttgatcgaccgcaccagccgcaaccgc
tgccagcactgcaggctgcagaagtgcttggcagtgggaatgtcacgagatgcggtgaag
tttggccgaatgtcaaagaagcagcgagacagcctgtatgctgaggtccagaagcaccgg
ctgcagcagcagcagcgagaccaccaacagcagcctggagaggcagagccactcacacct
agctatggtctctcagccaacggcctaacggagctacacgacgacctcagcggctacatg
gacggccacactcctgatggcagcaagcccgactctgcggtcagcagcttctacctggac
atccagccatcccctgaccaatcaggcttagacatcaacggtataaagccagagcccatc
tgcgactttgcccccggctctggcttctttccctactgctccttcaccaatggcgagacg
tctcccaccgtttctatggctgaactagagcacctggcccagaacatctcaaagtcacac
atggagacatgtcagtacctgagagaggagctgcagcagatgacctggcaggctttcctt
caggaggaggtggagagctaccagagcaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacggaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttt
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctctggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacaccgtctatttcgatggaaaa
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctct
gcctttgtgttgatgtctgctgaccgatcctggctgcaggagaaggtgaaagttgagaaa
ctccagcagaagatccaactggcccttcagcatgttctgcagaagaaccacagagaggat
ggtattctcacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagctcacggctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatataaggagctgttcggatcagactttgagcagtccatgcccgtcgatgggtaa
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