Cyprinodon variegatus (sheepshead minnow): 107087406
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Entry
107087406 CDS
T06110
Name
(RefSeq) fanconi-associated nuclease 1-like
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107087406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvg03400
]
107087406
Enzymes [BR:
cvg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
107087406
DNA repair and recombination proteins [BR:
cvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
107087406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
Fan1_SAP
VRR_NUC
FAN1_HTH
EPTP
TPR_12
SAP
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
107087406
NCBI-ProteinID:
XP_015234461
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MAERTSRGKLRRSLSLKNKKRQEAKAGSASISSFFSSQPPPSLACPLCGQLVPRFKINDH
IDLQCQNFDRGGGGGGGGNDASPQSELEQREEDTQTKTSPYFKKKICDQTPRDINSKTVV
RAIGLGSLSSKLSRHDRSKHAEVRDKPDQMSDAESTSSSQKENVQVEDSSGSVVCSSMEP
PAASAPLPAEKPAQVELPSEPPAKLTRRKKKAASSVRGKKAKYEGQRESEEASSGLGPEE
SSGGQQEADASPSPPDTLTSEEVKEQKQREDSAERPAAPSLPYYLRNFQTVLHAVLENED
DRTLFNQEDMSAVHGFQRLSVMAQKLYVRLFQRKLKWLQVNKLDYGEISSDLGPVAQELV
QLGFLQTENDLEDLGEALDLLPAPELKALAKTFHLGSSGTQKQQLVDGLLRLSRQRSFFS
LASSESRVGTVILKRAKQLAGSCVRLSRGPRAVFSRILLLFSLTDTMDEEEMAAGGQNQL
FTILLVNSGRLAFPDYTVQRVAKVFRDREDLIRYEASMRALLEVTLAMQAGQWEQALELY
NAAKGAWCQLRLNHDLSHQEELPVFLRSFTTGWAYTRILSRGVEILQRLRRYEEAVEELQ
ALLKQSVYCPDSRGRWWDRLALNLHQHLKKPDQAICAIREGLSDPLVRTGHKLSLHQRAL
RMKEAPSCKKYRLQLRELPTLQVQDVKHVTIRGQLFPHEGGTGKSRFLIPESEEGEGSII
CSVEEFCLDHYRQLGFDQGIHGEGSTFSTLFGLLMWDIIFMEGIPDVFRNPYQTCPLDFY
TDCFYENRKEAIASRVGLLQEATVETLRDMLQDVWESQEGKVCSLVSWERFSSLQQAQVL
CIDSIHILLIFLSIALEEFDRNRRIWINVLNVAQVFTLWREGLSDPLVRTGHKLSLHQRA
LRMKEAPSCKKYRLQLRELPTLQVQDVKHVTIRGQLFPHEGGTGKSRFLIPESEEGEGSI
ICSVEEFCLDHYRQLGFDQGIHGEGSTFSTLFGLLMWDIIFMEGIPDVFRNPYQTCPLDF
YTDCFYENRKEAIASRVGLLQEATVETLRDMLQDVWESQEGKVCSLVSWERFSSLQQAQL
VEVKGPNDRLSQKQQIWLDELQKLGADVEVCHVTATGARGARQEETNIQASN
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagaacgagcagaggcaaactgaggcgaagcttgtctctgaagaacaagaag
agacaagaagctaaagctggaagtgcttcaatcagctctttcttcagcagccagcctcca
cccagcctggcctgccccctgtgtggacaactggtccccagattcaagatcaatgatcac
atcgacctgcagtgtcagaactttgatagaggaggaggaggcggcggaggtgggaatgat
gcttcacctcaatctgagctggagcagagagaggaggacacacaaaccaagaccagccct
tatttcaagaagaagatctgtgatcagaccccacgtgacataaacagtaagactgtggtc
agagccattggcttagggagtctctcctcaaagctttccagacatgatcgcagcaaacat
gcagaggttagagataaacctgaccagatgagtgatgctgagtcaaccagcagctcccag
aaggaaaatgttcaggtggaagacagcagtggttcagtggtctgcagcagcatggagcct
ccagcagcatcagctccactgcctgcagagaaaccagcacaggtagagcttccatctgaa
ccacctgcaaaactaacgaggaggaaaaagaaagccgcctcctctgtcagaggaaagaaa
gcaaaatacgaaggtcagagagagtctgaggaggcgtcttctggtttgggtccagaggaa
agcagtgggggacagcaggaagctgatgcgtctccatctccccctgacaccctgacatca
gaggaggtgaaggaacagaagcagagggaggattctgcagagagacctgctgctccatca
cttccctactacctgaggaacttccagaccgtgctgcacgccgtgttggagaacgaagac
gacaggacactcttcaaccaggaggacatgtccgccgtccatggattccagcggttatct
gttatggctcagaagctctatgtgaggctcttccagaggaaactaaagtggctccaggtc
aataaactggattatggagaaatcagcagtgatctgggacctgttgcacaggaactggtt
cagttaggatttctacagacagagaatgacctggaggacctcggagaggctctggatctc
ctgccggctcctgaacttaaagctctcgctaaaactttccatctgggctcttctggcacc
cagaaacagcagttagtcgatgggcttctccgtctgagcaggcagaggtcttttttctct
ctggcctccagtgaaagcagagttgggacagtgatcctgaaacgggcaaagcagctggcg
ggctcctgcgtgcgtctgtctcgtgggcctcgggccgtcttctcccgcatcctgctgctc
ttctctttgacggacaccatggacgaggaggaaatggccgccggcggtcagaatcagctt
tttaccatcctgctggtcaactcgggtcgtctggcgttcccagactacaccgtgcagcgg
gttgccaaggtgttccgagatcgagaggatctcatcagatatgaagcatccatgcgagcc
cttctggaggtgaccctggccatgcaggctggtcagtgggagcaggcgctggagctttac
aacgccgctaaaggagcctggtgccagctccgcctcaaccacgacctgagtcaccaggaa
gagctgccggtcttcctccgcagcttcaccacaggatgggcctacacccgcatcttatcc
agaggagtggagattttacagaggctgcgtcgctatgaggaagcagtagaagaactgcag
gccttactgaagcagtcggtttactgtcctgacagccggggccgatggtgggacaggctg
gctctgaaccttcaccagcacctcaaaaagcccgatcaagctatctgtgctataagagag
gggttgtcggatcctctggttcgcacaggacacaaactctccctgcatcagagagctctc
aggatgaaagaggctcccagctgcaaaaagtaccgactccaactccgagagctgcccacc
ctccaagtccaagatgttaaacatgtgaccattcggggccagctgtttccccatgagggt
ggcacgggaaaatctagatttcttattccagagagtgaagaaggggaagggagcataatt
tgctctgtggaggagttctgcttggaccattaccgacagctcggctttgaccaagggatc
catggagagggatcaacattctccaccttgtttggtcttctgatgtgggacattatcttt
atggaaggtattcctgatgtctttaggaacccataccagacttgtcctctggacttttac
accgactgtttctatgaaaacagaaaggaagcaatagcctctcgtgttgggctgcttcag
gaggccacagtggaaacgctgcgcgacatgctgcaagatgtctgggaatcccaggagggc
aaagtgtgttcgctggtcagctgggagcgattctcatccctccagcaggctcaggtactc
tgcatagattccattcacattttattaatttttttaagcattgcattagaagagttcgat
agaaacagaagaatttggatcaacgtactaaatgtagctcaagtttttacgctctggaga
gaggggttgtcggatcctctggttcgcacaggacacaaactctccctgcatcagagagct
ctcaggatgaaagaggctcccagctgcaaaaagtaccgactccaactccgagagctgccc
accctccaagtccaagatgttaaacatgtgaccattcggggccagctgtttcctcatgag
ggcgggacgggaaaatctagatttcttattccagagagtgaagaaggggaagggagcata
atttgctctgtggaggagttctgcttggaccattaccgacagctcggctttgaccaaggg
atccatggagagggatcaacattctccaccttgtttggtcttctgatgtgggacattatc
tttatggaaggtattcctgatgtctttaggaacccataccagacttgtcctctggacttt
tacaccgactgtttctatgaaaacagaaaggaagcaatagcctctcgtgttgggctgctt
caggaggccacagtggaaacgctgcgcgacatgctgcaagatgtctgggaatcccaggag
ggcaaagtgtgttcgctggtcagctgggagcgattctcatccctccagcaggctcagctg
gtggaggtgaagggccccaacgaccgtttgtctcagaagcagcagatctggttggatgaa
ttgcagaaactcggggctgacgtcgaggtgtgtcatgtgacggccaccggagccagagga
gcccgtcaggaggaaacaaacatacaggcgtctaattag
DBGET
integrated database retrieval system
