Cyprinodon variegatus (sheepshead minnow): 107087524
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Entry
107087524 CDS
T06110
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5-like isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04060
Cytokine-cytokine receptor interaction
cvg04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107087524
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107087524
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cvg04050
]
107087524
04090 CD molecules [BR:
cvg04090
]
107087524
Cytokine receptors [BR:
cvg04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
107087524
CD molecules [BR:
cvg04090
]
Proteins
107087524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
TMEM154
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
107087524
NCBI-ProteinID:
XP_015234623
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MSSTHAVPPAECSVIHPLEAMKNKLVLLVVLLALNTNKVHPMPYKQEAGNCRNSETEYWN
EEVALCCKKCPPGHRMKQECTETADTQCEPCGLEQYIEDWNYSPNCLSCTKCKSKKGLEY
AQTCTSTRNSKCVCKTGTFCYLGFDDPYCTDCKGYKLCKPGERVSVEGTRNSDRVCEKCP
TNPCSSPSTITVSTVVTVNKTSTTPPGPKESTQTVKPILTVRPTSPEDPPTSKMVAVIAS
AAGILLLLIFVICLLTLCKRKWTKDSGNLPHKVDANGNCETAIKQNGHSSSSVESPMTSL
PMTSQEQVCLLAKGEVSSDQSLSSSDTETSIRTDGFSRNDSLRPLQPTLGIDNPSSVLSE
PMVLQSFTEPMAHRPSLSTQGSSQPTSPLIVSPLTNSPHVNVNITLHIGNGSCGTPSFQP
TDVNQSEYQLPFGQEEESVSSPQQEAGKLSLISVQESPTVCT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacgcatgccgtgccgcctgctgagtgctctgtaattcaccctctagaagcg
atgaagaacaaactggtgctgctggtggtccttctggcactcaataccaataaggttcac
ccgatgccctataagcaagaagctggaaattgtcgcaactcagaaacagaatactggaat
gaagaggttgctttatgctgcaagaagtgcccccctgggcatcggatgaaacaggagtgc
actgaaaccgctgacactcagtgtgaaccatgtgggcttgagcaatatatcgaggactgg
aactactctccaaactgtttatcctgcactaaatgcaaatcaaaaaagggtcttgagtat
gcccagacttgcacatctaccagaaactccaagtgtgtttgcaagactggaacattctgt
tatttagggtttgatgacccttactgcacagattgtaaaggatataaactttgcaaacct
ggtgagagagtttctgtagaaggtacacgtaactctgatagagtgtgtgaaaagtgcccc
accaatccatgttcaagccctagtacaattacagtttcaaccgtagttactgtaaacaaa
acctccacaacgccacctggcccaaaggagtccactcagactgtgaagcctatcttaacc
gtgagacccacgagccctgaagatccacctactagtaaaatggttgcagtcattgctagt
gctgctgggatccttctgcttcttatttttgtcatctgcctcctgaccctttgcaaaaga
aagtggactaaagactctggaaatctcccgcataaagtagatgcaaatggaaactgtgag
acagcaataaagcagaatggtcacagcagcagctctgtggaatctccaatgacatcacta
cctatgacctcccaagagcaagtgtgtttgctcgcaaaaggagaagtcagcagtgaccaa
agtctgagcagcagtgataccgaaacttcgatcaggacagatggtttcagcaggaacgac
tccctcaggcctctgcaacctactttaggtattgacaatccctcctctgtcctgtcggag
ccaatggtcttacagtccttcactgagcctatggctcatcgtcccagcctcagcacacag
ggctcctctcagcctaccagcccgctgattgtcagccccctaacaaacagtccccacgtt
aacgtcaacatcactttacatataggaaatggttcctgcgggacgccgtcttttcagccc
acagatgttaatcaatcagaatatcagcttccctttggacaggaagaggaatctgtcagc
tctcctcaacaagaagcaggcaaactgtctttgatatcagtccaggagagtcccactgtc
tgcacgtga
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