Cyprinodon variegatus (sheepshead minnow): 107087569
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Entry
107087569 CDS
T06110
Name
(RefSeq) platelet-activating factor receptor-like
KO
K04279
platelet-activating factor receptor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107087569
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107087569
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cvg04030
]
107087569
G protein-coupled receptors [BR:
cvg04030
]
Rhodopsin family
Others
Platelet activating factor
107087569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
CitMHS
DUF6249
YMF19
Tmemb_9
Motif
Other DBs
NCBI-GeneID:
107087569
NCBI-ProteinID:
XP_015234703
Ensembl:
ENSCVAG00000011436
UniProt:
A0A3Q2E1U5
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MANFTNTSEGISAVNGTFLDSEFRYVLFSVMYSIFFVLGFFSNLYVLFVLWRLREARAMG
EIRIYMTNLTIADLLFVSALPFWISYYRRGGDWIFNDFMCRVTGSFFFINTYGSILFLGA
ISLNRYWAVTRPLDAASSDHRCRGIIVCTLIWASIISMSMPYLTVRGINEDNTKNKTRCF
EGYHNGTNDEKRNIAVTHFLIIGMFFIVFFLVVICNFLIARALIYKSAPQSELYSETIKS
NRSTASSCKKPRKTRGVKRKALRMLIAVVGVFVLCFVPHHIVQGPWTLAVLQITEGWGHV
TWGQKTRQALNDAHQITWVLMGLNCILDPVVYFFATRKFRRFIMEHMRKLSRGEACSYTA
NTQISMDSRNPSQRLHSIQQHPNEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttcaccaacacgtctgaaggaatctctgctgtaaacgggacctttctggat
tcagagtttcgctatgtgcttttttctgtcatgtacagcatcttcttcgttttgggcttc
ttctctaacctttatgtgctgtttgtcctgtggcgcctccgtgaagcgagggctatggga
gaaatccgcatctacatgaccaacttgaccatcgctgatctgctttttgtgtctgcactc
cccttctggattagctattaccgacgtgggggggactggatcttcaatgacttcatgtgc
agggtgacaggatcattttttttcatcaacacctatggaagcatcctcttccttggagca
atcagtcttaaccggtactgggcggtcactcgccctcttgacgcagcctcttcagaccac
aggtgccgcgggatcattgtgtgtaccctaatatgggcctctatcatatctatgtccatg
ccctacttgacagttagaggtataaatgaagacaataccaaaaacaaaactcgatgcttt
gagggataccataatggaacaaatgatgaaaaaaggaatattgcagtgacgcatttctta
ataattgggatgttttttattgtattttttcttgttgtgatatgcaacttcctcattgcc
cgagccttgatttacaaaagtgcaccacagtcagagttgtactctgagacaatcaagtcc
aacagatcaacagcgtcttcatgtaaaaagcccagaaagaccagaggggtgaagaggaag
gctttgcggatgctcatagcagtggtgggggtgtttgtgttatgctttgtgcctcaccac
atagtccagggcccctggaccctggctgtgctgcagataacagagggctggggccatgtg
acatggggccagaaaacacggcaggcactaaacgatgcacatcagatcacctgggttctt
atgggccttaactgcatcctggatcctgtggtgtatttttttgccacaaggaagttcagg
aggttcatcatggagcacatgagaaagttatcaaggggtgaggcctgctcctatacagcc
aacacacagatatccatggacagcagaaaccctagtcaaagactccacagtatccaacaa
catccgaacgaggaataa
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