Cyprinodon variegatus (sheepshead minnow): 107087595
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Entry
107087595 CDS
T06110
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107087595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107087595
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107087595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107087595
NCBI-ProteinID:
XP_015234739
Ensembl:
ENSCVAG00000009917
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MEGRGHWGTKAEYILTVTGAIIGPGNIWRFPYLCYKNGGGVFFIPYILFIFTCGIPLFFL
ETALGQYTRQGGITCWRQICPLFQGLGYASHLIIAFTATSYIMILTWAFFYLFSSFGSHL
PWASCGNYWNTDSCFDSHLNLSMKSKVNTTLPVVEFWNRRVLKISGGINELGGLRWELAL
CLILCWIICYFCVWKGIKSTGKAAYFTATFPYFMLFVLLIRGVTLPGALDGIIYYVYPDI
SRLSDPQVWMDAGTQIFFSYAIGLGFLTSLGSYNTYNNNCYKDCFYLSLLNSGTSIVAGF
AIFSVLGFMTYEQGVDISEVAESGPGLAFIVYPRAVAMMPMPQVWSVCFFLMIILLGLDS
QFVGIECVMTSLVDHFPSYLNQGYRRELLLLVICCVSCLFGLLLVTEGGVYLLQLLDHHV
CSGSTLLILAFCQSVSIGWVYGTDRFYDNITEMIGYRPFPFMKYCWRYITPLVCFGTFIF
SIIKYTPLKFSNSYEYPLWANILGWFFATVSLSLIPLFVLFKLIQGQGTLRQVRKI
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggagggacggggccactgggggaccaaggcggagtacatcctcacagtcacaggagca
attatcgggcctggaaatatttggaggtttccttacctatgttacaaaaacggtggagga
gtgtttttcatcccatacatcttgtttatatttacgtgtggcatacccctgttctttctg
gaaactgcgctggggcagtacacccgtcagggaggaatcacatgctggcgtcagatctgt
ccactttttcaaggccttggctatgccagtcacctaatcatcgctttcactgcaacttct
tacatcatgatcctcacctgggcgttcttttacctgttctcatcctttggttcacattta
ccttgggcttcatgtgggaactactggaacacagactcatgctttgacagccatctgaat
ctgagcatgaaatccaaagtgaacactaccctcccagtcgtggagttctggaatcgaaga
gttttaaagatttctggtgggatcaacgagttgggtggactaaggtgggaactagcactg
tgcctcatcctgtgttggatcatctgctacttttgtgtctggaaaggaataaagtcaaca
ggaaaggcagcatactttacagccacctttccctattttatgctgtttgttctgctgata
agaggtgttacattgccaggagctctggatgggattatttattatgtctatcctgatatc
tctcgtctctcagatcctcaggtgtggatggacgctggtactcagatcttcttctcatat
gccatcggtctcggttttctcacttctcttgggagttataatacctacaacaataactgt
tataaggactgcttttacttgagtctgctgaacagtggaaccagcattgtagctggtttt
gccattttctctgttttgggcttcatgacatatgaacaaggcgtggatatttctgaagtg
gcagaatcaggccctgggttggcatttattgtctatccacgtgctgtggccatgatgcct
atgcctcaggtgtggtcagtgtgtttcttcctcatgattatactgcttggactagatagc
cagtttgttggtatagagtgtgtgatgacatccctggttgatcatttcccttcctacctg
aatcaaggctacaggagggagctgctcctgctggttatctgctgtgtctcctgcctgttt
ggactcttactagttactgagggcggggtttacttgctccagctgttggaccaccatgtc
tgcagtggcagcaccttgctgatccttgcgttctgccagtctgttagtattggatgggtt
tatggcacagaccgtttttatgacaacatcacagagatgattggttaccgtccctttcca
ttcatgaagtactgctggcggtacatcactcctcttgtttgctttggaaccttcatcttc
tccattatcaaatatactccactaaagttcagtaactcctacgaatatccactatgggcc
aatatcttgggctggttttttgccacagtctctctttctctcatcccactgtttgtgctt
tttaaattaatccaaggacaaggcacacttcgacaggtaagaaagatttaa
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