Cyprinodon variegatus (sheepshead minnow): 107087606
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Entry
107087606 CDS
T06110
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107087606 (dhx35)
Enzymes [BR:
cvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107087606 (dhx35)
Spliceosome [BR:
cvg03041
]
Complex C
Other components
Complex C specific factors
107087606 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
nSTAND3
AAA_7
AAA_30
AAA_23
Motif
Other DBs
NCBI-GeneID:
107087606
NCBI-ProteinID:
XP_015234762
Ensembl:
ENSCVAG00000010301
UniProt:
A0A3Q2CS13
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAPRSTMKFWKPGSEAPGISEERDLSSETTGSPIIFNPNTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALLGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKRYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRVIVASATLDAKKFHEFFNLNESGDPNKDTCGILTVEGRT
FPVDIFYTVSPVPDYVKATVETVMKIHEMEDDGDVLAFLTGQEEVEKVVSLLQEQARALS
RYGMKKHLRILPMYSGLPYADQMKVFERAPPTVRKIVVATNIAETSITINGIMFVIDCAF
VKLRAYNPRTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDYEKLPAATVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKDAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLVRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILRCIVSGFFANAARIHHSGSYRTLRDDLELHIHPSSVLYGEKPPKWVVFNEVMQTS
KYYMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccccgctccacgatgaaattttggaagccggggtctgaggctccggggatc
tcagaggaacgggatctgagctctgagaccaccggatcccccatcatcttcaatccaaac
acagccctctctatagagaagcagcggcaaaagcttccagtttttaagcacagaaacaac
atattatacttggttgaaagcttccagactgttattatagttggggagaccggatgtgga
aagacaacacagatccctcagtacctgctggaggctggctgggccgcggaggggaaagtg
attggagtgacgcagcctcgacgtgtggctgctatctcggttgctaaccgtgttgcggag
gagcgaggtgccctgctgggacacgaggtgggctacaccatccggttcgatgactgctct
gacccccaagccaccaggattaagtttctcacagatggaatgcttgtgcgagaaatgatg
gcagaccctcttttaaaaagatacagtgtgttgatgttggatgaagcacatgagagaact
ctgtacacagacatagccattggtctactgaaaaagattcaaaagaagaggcgggacctg
agggtgatagttgcctctgccactcttgatgccaagaaattccatgagttcttcaacctg
aatgagtctggggatcccaacaaggacacgtgtggaatcctgacagtagagggacgtact
tttccggtggacatcttctacactgtcagtccagtcccagattatgtgaaggccacagtg
gagacggtgatgaagattcatgagatggaagatgatggggacgttcttgctttcctcact
gggcaggaagaggtggagaaggtggtgtccctcctgcaagaacaagccagagctctttct
cgatatggtatgaagaaacacctgagaatcttgcccatgtactctggtctaccctatgca
gaccaaatgaaagtctttgaaagggctccccctactgttcgcaagattgtggtggccaca
aacatagctgagacgtctatcactataaatggtatcatgtttgtcatcgactgtgcattt
gtgaagctacgggcctacaatcctcgcactgccattgaatctctggtggtcactcccatc
tcaaaggcctcagccagccagagagctgggagggcaggacgaaaccgacctgggaagtgc
tttaggctatatacagaggaggactacgagaagctacctgctgctaccgttccagagatg
caacgctctaatttagcccctgtaatcctgcagctcaaagcattggggatagacaatgtt
ctgcgctttagcttcctttctcctcctccagcccagactatggttcaggctctggaactt
ctttacgctcttggaggtttggaccattacggccgtttgactgaccccatgggtgtgcgg
atggcggagtttcctctcagccccatgtttgctaagatgctcctagagtctggaaacttt
ggctgctccaaagagatagttaccatagctgccatgatgcagatccagaatatatttgtt
gtgcctccgaatcagaagaaagatgccgctcgtgaacacaggaaatttgcagtcgctgag
ggagaccacctcactatgctgaatgtatatgaggcattcattaagcatcagaaaagctcc
caatggtgtcaggagcattttctgaattacaaaggtcttgtccgcgccgtcacagtaaga
gagcagcttcgccgtctcatgaacaagtttaaagtgccacgaacttccagtgaaggtgac
ccagatgtgatcttgaggtgtattgtgtctggattctttgctaatgctgctcgcattcac
cactctggctcctatcgaactttacgagatgatcttgaacttcacattcatcccagctct
gtgttgtatggagagaagcctccgaagtgggtcgtctttaacgaagtgatgcaaacctca
aaatactacatgcgtgatgtgactgctgtggagtcatcctggctggtggagttggcccct
catttttacaagcaggctaagcatggttcgctggccagcaagagatctagagtcctctga
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integrated database retrieval system
