Cyprinodon variegatus (sheepshead minnow): 107087907
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Entry
107087907 CDS
T06110
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107087907 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107087907 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvg04147
]
107087907 (vps36)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
107087907 (vps36)
Exosome [BR:
cvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107087907 (vps36)
Exosomal proteins of colorectal cancer cells
107087907 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
TssO
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
107087907
NCBI-ProteinID:
XP_015235233
Ensembl:
ENSCVAG00000020811
UniProt:
A0A3Q2EGQ5
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVRLYDGDDKAKLNVGAALLSTHRLIWRDANNHDCCMA
MPLSQIIFFEEQAAGIGKSAKIVIHLHPSPANKEPGPYQNSKYSFIKLSFKEHGQIEFYR
RLSEEMTQKRWENTAVSQPIPTGTGPQAGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGGMLQAPLEERGGMMALTEVYCLVNRARGLELLSPEDLLNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVTEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNCF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaccggttttcgtggtcaaatgggcttttggaaataaacgaaactttagtgatacag
caaagaggtgtcagactatatgacggtgatgataaggcaaagttgaatgtcggagctgcc
ttgttgagtacccatcgattgatctggagggatgcaaataatcatgactgctgcatggcc
atgcccttgtctcagataattttctttgaggaacaggctgctggaataggaaagagtgca
aaaatagtcatccatctgcatccatcaccagccaacaaggaaccaggtccataccagaac
agcaagtactccttcatcaagctgtctttcaaagaacatgggcagattgagttttacagg
agactgtcagaagagatgacccaaaaaagatgggagaatactgcagtttcacagcctatc
ccaacaggaactggacctcaggcaggaaggacacgcgcagtgggcattgttggcattgag
agaaaaatagaggagaagaggaaagaaacagacaagaacatttcagaggcctttgaggat
ctcagtaagctgatggtgaaggctaaagaaatggtggaactgtccagatctattgccaac
aagatcaaagacaaacagggggatataacagaagatgagacgattcgctttaaatcttac
ctcctgagcatgggcattgctaaccctgttactagggaaacacatggatcgggtacacat
tatcatatgcagttggctaaacagctaggtggtatgctacaggctcctcttgaggagcga
ggaggtatgatggctcttacagaggtgtattgtctcgtcaatcgtgccagagggttggag
cttttatctcctgaagatttattaaacgcatgcaaaatgtttgagtccttgaaactcccc
ctgaggctgcgtgtgtttgacagcggtgtgatggtggtccagttgcagtctcacagtgag
gaggaaatgatagcctctgctttggacaatgtgacagaaaaaggctccctcacagcagag
gagtttgctaagctcttaggtctttctgttcttctgtctaaggagcggttgttgcttgca
gagaagatgggccacctttgtagggatgactctgttgaagggttaagattttaccctaac
tgtttttga
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integrated database retrieval system
