Cyprinodon variegatus (sheepshead minnow): 107087928
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Entry
107087928 CDS
T06110
Symbol
scaf4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107087928 (scaf4)
03041 Spliceosome [BR:
cvg03041
]
107087928 (scaf4)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107087928 (scaf4)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
107087928 (scaf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107087928
NCBI-ProteinID:
XP_015235269
Ensembl:
ENSCVAG00000019389
UniProt:
A0A3Q2EED2
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MEAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV
AGLYVVDSIVRQSRHQFGADKDVFGPRFTKNITGTFENLCLCPIEDRSKIVRVLNLWQKN
GVFKIEVIQPLLDMAAGSGSGTASITNAEEPGSPPSPAKEPINAVTANSTTTPAPPLHNS
DALAAVAQLFQSTQGQQLQQMLQNFQQQVVKPEANAQLPPSTAQTAAQSVPTGLAAAAPQ
PPVPSPQPPPPTHHAQPVQQKSTFDTKLLDRFDYDDEPDVGEEPKKDEASSQHTFMQQPP
AFPQHMEHFNTQMMNISQDISQQVPVPPNGQLQAGVLPGQSFPIAMPTMGHSLPGHPLPS
LAGHPGFPGVYPPQNSIQQQQESAGDMDHSSMRDGRPGRRSRSGSRSPKRRRSRSGSRSR
RSRHRRSRSRSRDRRHHSPRSRSQERREREKERERRQKGLPPPKSETLSICSTTLWVGQL
DKRTQQQDVASLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKLSRGLYKVNQKAI
KIAWALNKGIKPDFKQYWDVELGVTYIPWSKVREDQLAELKEGGMLDMDTLSPDWTSVRK
SSDHPEELTHNGRSEQQQPEETQVLPMAVTAAPPVQVPSLQQPMVGMGSLQPPVFPGPIG
MPPPGFAPGIPPPPFMRPGFNPLQMPPGFPPSGPMPLAPPPPPKGGVDAPSQDPAGLDAK
KNDEALENPNLFNNQMGHLGPPGGFLGGPLTNSTPGGPLVGHPGGPLVGHPGGPPMGHPG
SHPVGHPAGPPVGHHGGPPVGHPGGPPVGHPGGHPGGPPIGHPGGPPGGPPVGPPRGPPA
GPPGPGGHPGSIQSPSGSLLGTRPGMIRLQHPQGPPPSQMQRFPPPHGPRPPHPNMPSGP
PQMMPRGPHPQMMRNEPPQQQGGFGMPPPHNMRGPFPRGHGPPPQGPDSFIRPGGPRTFE
GQEEMDDRPPRGDRPGFRDREQERDRDWDRDRERDRGFGGGRRFGDGGRGGGGDRMDGRD
RLGGWQEDLGNSRGGGWERDRDRDRDRDRDRDRDRDRRDWRERRGSLDRDRERGRGDDGE
RDRVRVEGGERSRGEGGGSRDKARAPEVKGDKPRRSERRERTSRWDKDDRLAELENMDKF
RSSNSTEVTAGTPPVTVETRKDPIEEQAKKKEESEHLPAETTPAAAENPQPSESKELAQS
EPTKTKEKEEEAAAS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaacgcctttaatcaggagttattctccttgatggactccaagcctcct
atatctcgagctaagatgatctccatcaccaaatcagccataaaagctatgaagctctac
aaacacgtagttcagattgtggaaaagtttattaaaaagtgtaagccagagtataaagtc
gcaggcttgtatgtggtggattccattgtgaggcagtccaggcaccaatttggagcagac
aaagacgtgtttggtccaaggttcaccaaaaatatcacaggaaccttcgagaacctctgt
ctctgcccaatagaggaccggagcaagattgtgcgggttttgaacctgtggcagaagaac
ggagtgtttaagatcgaggttatccagccgctcttggacatggctgctggctctggcagt
ggtactgcttccatcacaaatgcagaagagccaggttctccaccatctccagccaaagag
cccataaatgcagtaacagctaactccacaacaacacccgctcctccgctgcataactcc
gatgccctcgctgctgtagcgcagctcttccagtccacgcagggacagcagcttcagcag
atgcttcagaacttccagcagcaggtggtgaaacctgaagctaatgctcagcttcctccg
tcgacagctcaaacggcggcccaaagtgtgcccacaggcctggccgcagctgctccccaa
cctcccgttccctcgccacagcctcctccacccacccaccacgcacagcccgtccagcaa
aagtctacttttgacacgaaactgctggaccgttttgactatgatgatgaaccagatgtt
ggagaagaacctaaaaaggatgaagcatcctcacagcatacttttatgcaacagcctcca
gccttccctcagcacatggagcactttaatacacagatgatgaacatctcacaagacatc
tcacaacaggttcctgtgcctcctaacggccagctgcaggctggtgttctgcctggacaa
agcttccctattgctatgccaacgatgggtcattctcttcctggacaccccctgcccagt
ttagctgggcatccaggcttcccaggggtatacccccctcaaaattctatccagcaacaa
caggaatctgcaggtgatatggaccattcttcaatgagagatggccgacctggccgacgg
tcccgttcaggctcgagatctccgaagaggagaaggtctcgatctggctcccgatcccgg
cggtccaggcacaggcgatctcgctcccgctccagagaccgccgtcaccattcaccacgc
tctcgctcgcaggagcgccgggaaagagagaaagaaagagagcgccggcaaaaaggcctt
ccgccacctaagagcgagactctaagcatttgtagtacaacactgtgggtgggtcagctg
gacaagagaactcagcagcaagatgtcgcctcattgctggaagaatttggacagattgaa
tcgataaatatgattcctccacgtggctgtgcttacattgtcatgatacacaggcaggat
gccttcagagcactgcagaagctcagcagaggattgtataaagttaaccagaaagcaata
aagattgcttgggctttaaacaaaggtataaagccagattttaagcagtactgggacgtg
gagcttggtgtcacctacataccttggtctaaagtcagagaggaccagttagcagagctc
aaagagggagggatgctggatatggataccttatcaccagactggactagtgtgagaaag
agctcagaccaccctgaagaactcactcataatggccgttctgagcaacagcagcctgag
gaaacccaggttttaccgatggctgttactgctgctcctcctgtacaagtgccctctttg
cagcagccaatggttggtatgggttctcttcaacccccggtatttcctggtcctatcggg
atgcctccacctggctttgctccaggcatcccccctcctcctttcatgagacctggcttc
aacccgttgcaaatgcctccaggtttccctccctcaggtcctatgccccttgctccccca
cctcctcctaaaggaggagttgacgccccatctcaagacccagcaggtctggatgccaag
aaaaatgatgaagcccttgagaatccaaacttatttaacaaccaaatgggccatttagga
cctccaggaggttttctaggtggacctttaacaaattccacccctggtggtcctctagtt
ggacacccaggtggacctttagttggacacccaggaggtcccccaatgggacaccctggt
agtcacccagtcggacatcccgctggtccgccagttggacatcatggtgggccccctgtc
ggacaccccggtgggcccccggtcggacaccctggtgggcaccccggtgggcccccgatc
ggacaccccggtggtcccccggggggtcccccggtcggacctccaagaggtcctccagct
ggacctccaggtcctggtggacacccaggaagcattcagtccccctctggtagtctactt
ggtacccgtcctggtatgatacgacttcagcacccccagggaccaccgccatcacaaatg
cagcgttttcctccaccccatgggcctagaccacctcaccccaacatgccctctgggcct
ccacagatgatgcccagggggccacaccctcagatgatgcgaaacgagccaccgcaacag
caaggaggatttgggatgccacctccacacaacatgagaggtcccttccctcgtggacat
ggtccgccccctcaaggtccagattcgtttataagaccaggtggtccaagaaccttcgaa
ggacaggaggaaatggatgacagaccacccaggggagacaggcctggattcagggatcga
gaacaagaaagggacagagactgggatcgagacagagaaagggacagagggtttggaggt
ggaagacgttttggtgatggagggagaggaggcggcggtgaccgaatggatgggagggac
aggcttgggggttggcaggaggatttaggaaactcccgtgggggaggatgggagagagac
cgggacagagaccgcgatcgggaccgagaccgtgatcgggacagagatagacgggactgg
agggagaggcgaggcagccttgatagagacagagagcgagggcgcggtgatgatggtgag
agggatagggtgagagtggagggaggagaaagaagcaggggagaaggaggagggagccgg
gacaaagccagagcacccgaagtcaaaggagacaaaccaaggcggtcagagaggcgagag
aggacatcacggtgggataaggatgatcgactggccgaactggaaaacatggacaagttc
aggagctctaacagcacagaggtaactgctgggactcctcctgttactgtggaaaccagg
aaagatccaattgaggagcaagctaaaaagaaagaggagtcagaacatttgcctgcagag
acgactcctgctgctgctgaaaacccacagccctctgaatctaaagagctggctcaaagt
gagcccacaaaaacaaaagaaaaagaggaagaagcagcagcatcgtag
DBGET
integrated database retrieval system
