Cyprinodon variegatus (sheepshead minnow): 107087933
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Entry
107087933 CDS
T06110
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107087933 (paxbp1)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107087933 (paxbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
DUF4294
Med15_fungi
Motif
Other DBs
NCBI-GeneID:
107087933
NCBI-ProteinID:
XP_015235276
Ensembl:
ENSCVAG00000021269
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MFKKAKRVNLRRRNDSDEDEHEDRQPQPLSLAPTSFGPVVEIPFMETSGAASSDENSYSN
GFLSNLNFARPIKKEKKIKDVAPVAPPTKASLLSFDDEEEGSEVFRVKKPNHSKKIVKQL
KKEYKEDLQKTGTVKQETKSDVPPPPVFTVKEEVISRASSEHGEEEMEVESGDEQDEDKK
AQGGQLSRGRNMGASFNTLSSLTSLKPGEIPDAAFIHAARKRRQLARELGGEPPLVEAEP
SKKHLMQDDRDGSDDEDEDEKRIRFSGVKNKSQRQKRLVLPCIEGSDDEALDTGHDEEVS
RWEQEQIRKGISIPQVQSSQPEESTAYYQNSYETQPYGSSYNMPFTYSTVAPQPGKIPGL
SDNVSVHYGAPVCDLTPVSIDLVKKRLRDRLSQMHAGNSANIKRYEQIRDDLESSESTIQ
QLEGSSNDNADRYKFLQEMRGYVGDLLECFSEKVPAVLELEAAMHQLLRQRAARLAQRRQ
DDIKDESSEFASLSNKAVMAPSLDSLGRDRVAYQEHSRQRRIAEREARRTRRRQAREQNG
KRAEHKEGLSSDDEETSTDITSFNMERDRIKAESKKVFEDVVEDFHSLDCIKSRFEVWRK
EYPDCYRDAYIGLCLPKLFNPLVRLQLITWNPLEEPCPNFEYMLWFESLLFYGFEEHIML
QKEDEDIGLLPAIVEKVLLSKLSVLAEQVWDPLSSSQTARLVSFIHRLAGGYPTVLHGDN
QYTQELLKTIVMRTRRTLDEDIFLPLYPKNVMDNKNSGAYLFYQRQFWSCIKLLGNIIQW
DGILSFSCLRDLALDSTLNRYILSALQSTDIGEENVQKCQKVVECLPVQWFSGLKGQQTL
PQLEPLCRYLTHLANTLHRSSVRGSDIERRTAKEQIREVVKMLGRMNALDHIIAVAEEQG
VKDIKQLMEVK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaaggcgaaaagagtgaacttgcggcgaaggaatgactccgacgaggatgag
catgaggacaggcagcctcagccgctgtctctggcgcccacatccttcgggcctgtggta
gaaatccctttcatggagaccagcggagctgcgagcagcgacgagaacagttacagtaac
ggctttctgtccaacttaaacttcgcgagacctataaagaaggaaaagaagatcaaagat
gttgcccctgtcgctcctcctactaaggccagtttgctgagtttcgacgatgaagaagag
ggatccgaggtgttcagagtgaagaaacccaaccacagcaagaagattgtcaagcagctg
aaaaaagaatataaagaagatttgcagaaaactggaactgtgaaacaggaaaccaaatca
gatgttccacctccaccagtgtttaccgtaaaagaggaggttatcagcagagcgagcagt
gaacatggggaggaggagatggaggtggagagtggcgatgaacaggatgaagacaaaaaa
gcccaaggcggtcagctgtccaggggcaggaacatgggagcatcatttaacacactgtcc
tcccttactagcctaaagccaggagagatccctgatgcagcgttcatccacgctgccagg
aagcgccggcagctagccagagagctgggcggggaaccccctctggtcgaagccgagcct
tccaagaaacatctgatgcaagatgacagagatggcagcgatgatgaagatgaggacgag
aagagaatccgctttagtggagtcaagaacaaaagtcagaggcagaagagattggtactg
ccctgtattgagggtagtgatgatgaagcactggatacaggtcatgatgaggaggtgagc
cgctgggagcaagaacagatcaggaaaggaatcagcatacctcaggttcaaagcagtcag
ccagaggagagcacagcctactaccagaacagctatgagactcaaccctacggctcctcg
tacaatatgcctttcacctacagtacagtggctccacagcctgggaagatacctggcctc
tctgacaatgtctctgttcactacggggcccctgtctgtgatctaaccccagtatccatc
gatctggtaaagaaacgcctgcgggataggctttcccagatgcatgcaggcaacagcgcg
aatatcaaacgctacgaacagatcagggatgacctggagtcctctgagagcaccatccag
cagcttgagggttcctccaacgataatgctgatcgatataaattcttgcaagagatgcga
gggtatgttggagacttgcttgagtgtttcagtgaaaaggtgcctgctgtcctggagctg
gaggctgccatgcaccagttactaaggcaacgggctgcacggcttgcccagagaagacag
gatgatattaaagatgaatcgtcggagtttgcaagcctttcaaataaagctgtcatggcg
cccagtctggactcattgggtcgagaccgtgtcgcataccaagagcacagtcggcagagg
aggatagctgaaagagaagctagaagaactcgtcgacgacaagcaagagagcagaatggg
aaaagggctgagcataaagaaggcctgtcatctgatgatgaggaaacttctactgacatc
accagcttcaacatggaaagagaccgtatcaaagcagaaagtaaaaaagtatttgaggat
gtggtggaggactttcattctcttgactgcatcaaatcccgttttgaagtgtggagaaag
gaatacccggactgctacagagacgcttacatcggcctctgtttacccaaactcttcaat
cctttagttcgtctgcagctcatcacgtggaaccctctcgaggagccgtgtccaaacttt
gagtatatgctgtggttcgagtctcttctgttttatggatttgaggagcacataatgctt
caaaaagaagacgaggacattggattgcttcccgctattgtagagaaagttcttctatcc
aaactgtcagtgctggcagagcaggtgtgggacccgctgtcaagcagtcagacagcaagg
ctggtgagcttcattcacagacttgctggaggttatccaactgtgctgcatggagacaac
cagtacacacaggaacttttgaaaacgatagtcatgaggacccggcggactctggatgaa
gacatcttccttccactttaccctaaaaatgttatggacaacaagaacagtggtgcctac
ctgttctaccagcgacagttctggtcctgcataaagctgcttggcaacatcattcagtgg
gatggcatcttatccttttcctgtctgagggatctggctttggacagcactcttaacaga
tacatcctctctgcacttcagagtacagatataggagaggagaatgtgcagaagtgccag
aaggtggtggagtgtttgccagtacagtggttctcagggctgaaaggccagcagaccctt
cctcagttggagcccttgtgtcgctacctcacacacctagctaacactctgcaccgcagc
agtgtgcggggttctgatattgaacggcgcaccgctaaggagcaaataagggaagtggtg
aagatgttgggacgcatgaacgccctggaccacatcatcgccgtggcagaagagcaaggc
gttaaagacatcaaacagctcatggaagtgaaataa
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