Cyprinodon variegatus (sheepshead minnow): 107087939
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Entry
107087939 CDS
T06110
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04060
Cytokine-cytokine receptor interaction
cvg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107087939 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
107087939 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cvg04052
]
107087939 (gdf5)
Cytokines and neuropeptides [BR:
cvg04052
]
Cytokines
Transforming growth factors (RSTK binding)
107087939 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
DUF6691
Motif
Other DBs
NCBI-GeneID:
107087939
NCBI-ProteinID:
XP_015235283
Ensembl:
ENSCVAG00000018853
UniProt:
A0A3Q2DBS1
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MNVVKRLSLLLCCWTLIYLHPVRGSLSRTRLTEHRLGEAVERTGGAQRGIGVSTPAAGRQ
QSPAAGSWKPAARTRAGQPLIKEETTPKRSKQAAGSPSGNREHQQQQQQQPNGALNLGRK
EAARSWVPAADARFKPHIPAGINARAAVGRDSPKAAAKASAAAAAARSGFPPAAQRGVTN
RRQKLGDKQPLVTPHDYMLSLYWSLSSGDLNSSALHEAGMANTITSFVDKGHDDRGPVLR
RQRYQFNISSLERDGLLGAELRILRKLVSDPRLALAGLAAGEERGRGGSGPVLKLHTCAS
GKQKPVLLQTKTLEDLLSGFGTKWEVFDIYKVFKGFKNQQDQFSQQLCFELEALEHRGGR
SLDLRTLGFARTGRTNKEKAFLLAFGRSKKRDLFYNEIKARSGHDNKTVYEYLFNQRRMR
RAPPPRNSKKISRPSLQIPPQHQASKTRPRCHRRRLHVNFKEMGWDDWIIAPLEYDAYHC
DGACDFPIRSHLEPTNHAIIQTLINSMDPDATPPTCCVPTRLSAISILYIDSANNVVYKQ
YEEMVVESCGCR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtaaagcgtctttctctcctgctctgctgctggactctcatctacctgcat
cctgtccgcggttctctcagccggaccagactcaccgaacacagacttggggaggcggtg
gagcgcacaggaggagcccaacgtgggatcggggtgtctacgccagctgcagggaggcag
cagagccccgccgcgggaagctggaaacctgcggcgcgaacccgcgcaggacagccgctg
attaaagaggagacgaccccgaagagaagcaagcaggctgcggggtccccatcagggaac
cgagagcatcagcagcagcagcagcagcagccaaacggcgcgctcaacctggggcgtaaa
gaggctgcgcgctcctgggtccccgctgccgatgcgcgctttaaaccgcacatccccgca
ggcatcaacgcacgtgcggctgtaggtagagactcaccgaaagccgctgccaaggcgagc
gcagcggctgctgcggcgcgcagcggctttccacctgcggcgcagcgcggagtcaccaac
aggaggcagaaactgggcgacaagcagccgctggtgacccctcacgactacatgctgtcc
ctctactggtccctgagcagcggggacctgaacagcagcgcgctgcatgaggccggcatg
gccaacaccatcaccagcttcgtggataaaggacacgatgatcgagggcctgtcctgcgc
cgtcagcggtatcagttcaacatcagctctttggagcgggacgggctcctgggtgcagag
ctacgcatcctgaggaagctggtgtctgacccccgcttggctttggcgggtctcgcagca
ggtgaagaaagaggaagaggaggatccggcccagtcctgaagctgcacacctgtgcttca
ggcaaacagaaaccagttctcctccagactaagaccctggaggatctcctcagtggattc
ggcaccaaatgggaagtgtttgacatctataaggtcttcaagggattcaaaaaccagcag
gaccagttctcccagcagctctgctttgagctggaggccctggagcacagaggaggtcgc
tctctagacctgagaactcttgggttcgctcgaaccggcaggaccaacaaggagaaggct
ttcctcctggcatttgggagaagcaagaagcgcgacctcttttacaatgagatcaaagcc
cgttcaggccacgacaacaaaaccgtctatgaatacctgttcaaccagcgacgaatgaga
cgcgctcccccaccaagaaactccaagaagatctcgcgcccctccctgcagatccctcct
caacaccaggcgtccaagacgaggcctcgctgccaccgtcggcggctccacgttaacttt
aaggagatgggctgggatgactggatcatcgctcccctggagtacgacgcctatcactgc
gacggcgcctgtgacttccccatccgctcgcacctggagcccaccaaccacgccatcata
cagaccctgatcaactccatggacccagatgcgactccacccacctgctgcgtcccgact
cgcctcagcgccatcagcatcctctacatcgactctgccaataacgtcgtctacaagcag
tacgaggagatggtggtggagtcctgcggctgcaggtag
DBGET
integrated database retrieval system
