KEGG   Cyprinodon variegatus (sheepshead minnow): 107088001
Entry
107088001         CDS       T06110                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2 isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107088001 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cvg01009]
    107088001 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvg03021]
    107088001 (ell2)
Protein phosphatases and associated proteins [BR:cvg01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107088001 (ell2)
Transcription machinery [BR:cvg03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     107088001 (ell2)
    Little elongation complex (LEC)
     107088001 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 107088001
NCBI-ProteinID: XP_015235379
Ensembl: ENSCVAG00000017891
UniProt: A0A3Q2D8T4
LinkDB
Position
Unknown
AA seq 672 aa
MLRLQRDDGGGLVKMAALSEDGRYGLNCGQQGVERVSVLHVKLTETALRAIENYQSSTNI
PSLRPTVQFKGLQGHIKIPKTDSSDTFHNFDFYLSNVGKDNPQGSFECIHQYVSSSGASH
LALLATVQDKVTVCATSDSYQVTRERMTQAAEDTRERGTKVIKPGGQYRGKQVHTRKPAL
SALDVVPERKRSTPINPANTIRKCLSNNPVSQKPLRDRIIHLLALKSYKKLEVLGRLQRD
GINQKDRNSLGTTLQQVANLNPKDNTYSLKEFIYRDVQRDWLGYSEDEKIQVDRMLARKL
GLPTEKVSSNNSPKDGFPSSPQKRQPDFDFIDPLAPKKARISHLSSRGPAASSSDRREDE
SSPTSKHSSLPPNVTSGPPSHLPVSSHPPAPSHQHLSPASNSNSPSTPEGCGTQDLPMDQ
SSSCRDPSPSPLPRSLQDRCKHPVPRAAASPSPPPRTSLTVTSTVITSSPLPSSTSKKFK
KKSKKHKDKDRERNKGKQPERACSSPPVAEEQAEESSTVKKRNDADEVIEEAVEKPYKEQ
VEETLVLSSESSSKVETPDYVVKYTALVSLDQRQSYKDDFNAEYDEYRQLHARVEGITRR
FTQLDAQCRKLVPGTKEHQKIQIEVLKEYKKMKQHNPNYHEEKQRCEYLHNKLAHIKRLI
ADFDQRRAQAWC
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgctccggcttcagagggacgatggtggagggctggtaaagatggcggctctctccgag
gatgggaggtacggattaaattgtggccaacagggcgtcgagagagtctccgtactgcac
gtcaagttgaccgaaacggcgctgagagccatagaaaactaccaaagtagtacgaatata
ccatcgttacggccaacggtacaattcaagggactccaagggcacattaaaattcccaag
accgactcctctgacacgttccacaattttgatttctacctgtctaatgtgggaaaggac
aaccctcagggaagctttgagtgcatccaccagtatgtgtccagctcaggggcctcacac
ctggcattgttggcgaccgttcaggacaaggtcacagtgtgcgccaccagtgactcttac
caggtgacacgggaacgtatgacccaggccgcggaggacacacgtgaacgggggaccaaa
gtcattaagcccggggggcagtatcgaggaaagcaggttcacactcgtaagccagcgtta
tcagccctagatgtagtcccagagcgcaaacgctccacccctataaacccagccaacact
atacgcaagtgcctttccaacaaccctgtatcccagaagcccctgcgggaccgcatcatt
cacctgctagcgctgaagtcgtacaagaagctggaagtgctcggccgtttgcagcgggac
ggaattaaccagaaggaccggaactcactggggaccacattgcaacaagtggcaaacctg
aatcccaaagacaacacatactcgttgaaggagtttatataccgcgatgttcagcgagac
tggctcggatattctgaggatgagaagatccaagttgaccggatgctagctcgtaaatta
ggtcttcctactgagaaagtctcctcaaacaattcacctaaagacggtttcccttcatcc
ccacagaagcgccagcctgactttgacttcatcgatcctttggctcccaagaaagcccgc
atctctcacctcagcagtcgagggccagcagcctcttcctctgaccgccgtgaggacgag
agcagccccacctccaaacactcgtccctgccccccaacgtaacctcagggcctcccagc
catctccccgtttcgtcccacccgccagcaccttcacatcagcatctcagcccagcctcc
aactccaactcccccagcaccccagaaggctgcggcactcaggacctgcccatggaccag
agttcctcctgcagagacccctcacccagcccccttcctcgctccttgcaggaccgctgt
aagcaccctgtccccagagcagccgcctctcccagcccgcccccccgcacctctctcaca
gttacctccactgtcatcaccagctcccctttgcctagcagtacaagtaagaaattcaag
aagaaatccaagaagcacaaagacaaagatcgtgagaggaacaaagggaaacaaccagaa
agagcctgtagtagtcctcctgtggcagaagaacaggctgaggagagtagcacagtgaag
aagaggaacgatgctgacgaagtcatcgaggaagctgtggagaaaccttacaaagaacaa
gttgaagagacattggtcctgtcctctgaatcttcttccaaagttgagacgcctgattat
gtagtgaagtacacagccctggtgtctctcgaccagaggcagagctacaaagacgacttc
aacgcagaatatgacgagtatcgtcagctgcatgcccgtgtggagggcatcaccaggcgc
ttcactcagctggatgctcagtgtcggaagctggtacctggcactaaggagcaccagaaa
atacaaatcgaggtcttgaaagagtacaaaaagatgaaacaacacaaccccaactaccat
gaagagaaacagcgctgtgaatacctgcacaacaaactggcccatatcaaacgactaatc
gctgattttgaccagcgcagagcccaggcctggtgctga

DBGET integrated database retrieval system