Cyprinodon variegatus (sheepshead minnow): 107088099
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Entry
107088099 CDS
T06110
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04010
MAPK signaling pathway
cvg04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107088099
04020 Calcium signaling pathway
107088099
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107088099
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107088099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107088099
NCBI-ProteinID:
XP_015235527
LinkDB
All DBs
Position
Unknown
AA seq
2490 aa
AA seq
DB search
MTDGEGRARFQYEECPEKREVLEDVRLSVSAAHWTDSPGHDVDQDRQKGEGQEEEQKQEE
EKEEVEKERRQSFSVRGERRDEWRAEVQECEEEQEPELEVEAGPTLGVRITAPIRDPDCV
SEEEEQQPYPALASVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMFQPC
EDVSCLSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGV
MEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFI
FGIVGVQLWAGLLRNRCFLGEDIITLYNLSINPYYMSEEGEDSPFICSAPRENGMLRCHN
VPPFNQRGEDCSLPAPHHSSSLIGSPPGAGGTSNSSCVNWNQYYNVCRPGDLNPHKGAVN
FDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIAT
QFSETKQRENALMREQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQRMYY
GWHSKRRKKVNPNGGGIGSNGGGNGHGQGSSRGSGPGTALWLRPIHNLLQHHQHQHCRLS
NGGQHTINTTTAEHTDREGRVERGDELEMTSLSVTRESTNGDNPPDVSQGMGALLGQLNG
GMNYPTILPSFVCSYSSKTPPPHSKQCGRSPEQHPLNHPASEHTEALSKLYQLMGQHSRQ
KLLFQLAGVVPSPLLLELLSCPMCARSLETLELELGDLEGGKAEADGLHDFQQGCDLRGL
RRRFRRCEVVEYKNGVFRAWKDFREKLRRIVESKYFNRGIMIAILVNTLSMGIEYHEQPE
ELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGG
LSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGC
KFSLRMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALM
TFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFDEDEKVEQLRDTELKMYSLML
TANGHVDPRGIMAPPIIMHTAATPMPTPKGSLGPESVLGEELMYREGVNQHGEAGLGVSE
IGSHAESRRGSSTSMDPSTYDQRSPNLSSPGRRSPLPLRGSISSWGSRRSSWNSLGRAPS
LKRRDTSGERESLLSGEGGEEEECQDQQEEGVVKNRLRLETLEPLQASSLCPAIMAEYGD
CNGRTVTYDPNGNSDPKDDYTSEDDLDDDSPFCYWIRRELHNMKPRWCKEHENWTLYLFS
PESPVRMWCQAVITHKLFDHVVLVFIFLNCITIALERPDIQIHSTERVFLSVSNYIFTVI
FLAEMAVKVVALGFCFGDQSYLKSSWNILDGVLVFVSMVDILVSLAYTGTNRILGILRVL
RLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYH
CEGLDTRNITNKSDCLQANYKWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVG
VDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRL
KMIDKKRRSKENGGAEAKQRPYYADYSPLRLTIHTLCTSHYLDLFITFIICINVFTMSIE
HYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGFHRFFKDRWNQLDVGIVALSIMGIT
LEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFM
LLFFIYAALGVELFGKLECSDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDT
LRECQPHESHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMD
AEIALEMEEERQRRQSTGSNNSSMGGTYIGPCPNSLEEEEDLQYSDQDQLSSGKMSVSRM
HSLPNDSYMFQPVRPASAPYPLKEVDVSSQYQHAASVVSVQSQPCESRSLLQVPDASPLH
PQSTPSLTLPRIAPPTPGPSPRALHRQGAVKVDSVESQSCEQQERSSSAHLPSRSSSSLS
PLPPLCSSSSALPPCSKSPSSLPPSPSSLLPLPYPPSFLLPPPPSPRLPSRSSSLRRPRA
PSAISLSDPADAEVYHITSSARHRWRDEEGGEQDNRRKAGRSHSLSPYGSPHSLDLIPTL
PPPSNRSTLSLLGEGSKDIKKGFSVDNHGFLEKPQSEPAGPLDEQRRHSIEVCLPKAVIT
TDSQSFTLETHRSDKGTQAFPVRVQSVGGRQRKKKTSPPCISIHPPVEKEQPLLPSPPKL
ADCSMMLRRRTPSNDLTLHSDTPADGQLRTQMQTPLTPIHVPLDAHSPSHTLSPSKGSTQ
THTPPPHIPISPNVFIQPHAPLLPTVMPFSQPVMRHSPLAGDCIPLPRFTYDQPQSRYTG
EPESAACSSPFNNRLGSSPGFSAKNRRTAQ
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcggtttcagtacgaagagtgcccagagaagagggag
gtgctggaggacgtgaggctttctgtatcagcagcccactggaccgactctccaggtcat
gatgttgaccaagatagacaaaaaggagaaggccaagaagaggagcaaaaacaggaggag
gagaaggaggaggtggagaaggaaaggagacagagctttagtgttcgaggagaaaggaga
gacgaatggagagctgaagttcaggaatgtgaggaggagcaggagccagagctggaagta
gaagctgggcctacgctgggagtccgtatcacagcaccaatccgtgacccggactgtgtg
tccgaggaggaggagcagcagccgtatccggccctggcttctgtggctttcttttgcctg
aagcaaacaacaagaccccgcaactggtgtcttcgcatggtctgtaacccgtggttcgag
cacgtgtctatgctggtgatcctgttaaactgtgtgaccctggggatgtttcagccttgc
gaggatgttagctgcctgtcagagtggtgtcgtatcttgcaggtactggatgattgcatc
ttcgctttctttgcggtggagatggtcataaagatggtggctcttggaatttttggcccc
aattgttacctcggcgacaaatggaaccagctcgacttcgtcattgttatggcaggggtg
atggagtattccctggatggccacaatgccagtctgtcagcaatccgtactgttcgagta
ctcaggccactgcgggctatcaacagagtaccaagtatgaggatcttggtgacgctgctg
ctggacaccttacccatgctgggaaatgtgctccttctctgcttctttgtcttttttata
tttggcattgtgggagtccaactgtgggccggactgctgcgcaaccgctgcttcctggga
gaagacataataacgctttacaacctctccataaacccatactacatgtctgaggaaggt
gaagacagcccatttatctgctctgctcccagagagaacgggatgctgcgctgccataat
gtaccgccctttaaccagagaggagaggattgttcgttacctgctccccatcacagttct
tctctcattggttcaccacctggagcgggtgggacgagcaatagcagctgtgttaactgg
aaccagtactacaacgtctgccgcccaggggacctcaacccccataagggagcagttaac
tttgacaatattggctacgcatggatagctatattccaggtcatcacactggaaggatgg
gtggacatcatgtattacgtcatggatgctcactccttctacaattttatatattttata
ctgctcattattgtgggctctttcttcatgataaatttgtgcctcgtggtcatcgccacc
cagttttctgagacaaagcaaagagaaaacgccttgatgagggagcaacgtgctcgctac
ttgtctaatgattcaactctagccagttacagcgagccaggctcatgctatgaggagatg
ctacgatatatcagtcatctttacaggaagttcaggcgcaggctgcagagaatgtactat
ggatggcacagcaaaaggcgtaaaaaggtgaaccctaatggcggtggaattggcagtaat
ggtggtgggaacggacatggccaaggttccagcaggggttcaggacctggcacagcatta
tggctgaggccaattcataacctcctgcagcaccatcaacaccaacactgtcgcctcagc
aacggtggacagcacacaatcaacaccacaactgctgagcacacggatcgggaaggccgt
gttgaaagaggggatgagttggagatgacgtctctttctgttacaagagaaagtacaaac
ggcgataatcctcctgatgtctctcagggaatgggtgccctgcttgggcaactaaacggg
gggatgaactatcctaccattctgccatcttttgtgtgcagctacagtagtaagacgccg
ccccctcactcgaagcagtgcgggcgcagtccagagcaacatccattgaaccatccagcg
tctgagcacacagaagccctgagcaagctttaccagcttatgggacagcacagtcgtcag
aaactgctttttcagctggcaggcgtggtgccaagccctctgcttttggagttgcttagc
tgccctatgtgtgcccgcagtctagagaccctggaactggaactgggagacctggaaggg
ggtaaagcagaggcagatggactacatgactttcagcaggggtgtgatctaagaggactg
cgacgtcggtttcgacggtgtgaagttgtggaatacaaaaacggagtgtttcgggcctgg
aaggactttagggaaaaattgaggagaattgttgaaagtaaatatttcaaccggggaatt
atgattgccatcctcgtcaataccctcagcatgggaatagagtaccatgaacagcctgaa
gaactgacggatgtgttggagattagtaacattgttttcaccagcatgtttgtgctggag
atgggcttcatgcttctggctttcggtttgtttggatacattagaaacccttacaacatc
tttgacagcattattgtcatcataagtgtgtgggagataattggtcaagcggatggaggt
ttgtcagtcctgcggacttttcgcctgttgcgagtgctgaagctcgtacgctttctacct
gccctgaggaggcagctggtggtgttgatgaagaccatggacaatgtggccaccttctgc
atgctgctgatgcttttcatcttcactttcagcattcttggcatgcatctttttggatgt
aaatttagtctaagaatggagaacggggacaccattcctgatcgcaaaaactttgactct
ctactctgggccatcgtcactgtatttcagatccttacccaggaggactggaacgtggtg
ctgtataatggcatggcttctacctctccatgggcagctctctacttcgtagctctcatg
acgtttggcaattatgtgctcttcaatttattggttgccattttggttgaaggcttccag
gctgagggtgatgccaatcgatcagagtcagatgacgaaaagaaatctgacaactttgat
gaagatgaaaaagttgaacagctcagagatacagagctcaaaatgtactctctgatgctg
acagccaacggtcatgttgaccctcgtggcattatggctcctcccataataatgcacaca
gcagccactcccatgccaacacctaagggctccctaggtcctgagtctgtcttaggagag
gaactgatgtacagagaaggagtaaatcaacatggagaagctggactgggcgtgtctgaa
atagggagtcatgcggagtctcggcgtggaagctcaacatcaatggacccatcaacctat
gaccagcgctctcctaatctctcaagccctggacggcgctcacctcttcctctccgtggt
tccatcagctcatggggaagtcgccgctccagctggaacagtctggggagagcaccaagc
ctgaagaggcgagacaccagtggagagagggaaagtttattgtccggagaaggtggagaa
gaggaagagtgccaagatcaacaggaggaaggtgtggtaaagaacagattgaggctggag
accctggagccgctgcaagcatcttctctttgccctgccataatggcagagtatggcgac
tgcaatgggagaactgtgacatatgatccgaacggaaactcagaccctaaagatgactat
acgtccgaggatgacttggatgatgatagtcctttctgctactggatcaggagggagctc
cataacatgaaaccccggtggtgtaaggaacacgaaaactggacactatatttgttctca
ccagagagcccagtccgtatgtggtgccaagcggtgatcactcacaaattgttcgaccat
gtggttctggttttcatctttctcaactgcatcactatcgctctggagaggcctgatata
cagattcatagcacggagcgagtgtttctaagtgtgtccaactatattttcactgtgatc
ttcctggcagagatggcagtcaaggttgtagctcttggtttctgtttcggggatcagagc
taccttaagtcaagttggaacattttggatggagttttggtttttgtgtccatggtggac
atcctggtctctctggcctacactggtaccaacaggatcctggggattctcagagtcctt
cgtcttctacgcacccttcgccctctaagggttatcagccgtgccccaggactgaagctg
gttgtggagacactcatcacatctcttagacctattgggaacattgtgttgatctgctgc
gccttcttcattgtgtttggaatcttgggggtccagctgttcaaaggaaagttttaccac
tgtgagggtctggacaccaggaacatcacaaacaagtcagactgtctacaggccaactac
aagtggatccgaaggaagtacaattttgacaacttgattcaggctttgatgtctttgttt
gtactgtcatgtaaagatggctgggtcaacattatgtacgatggactggatgcagttggg
gtcgatcagcagcctgtgaggaaccacaacccctggatgctgctctacttcatctccttc
ctgctgattgtcagtttcttcgttctcaacatgtttgttggagtggttgtggaaaacttc
cacaagtgccggcaggaccaggaggaggaggaggcccgtttacgagaggagaagaggctc
aaaatgatagataaaaagcgcaggagtaaggagaatggaggggctgaggctaaacagaga
ccttactatgccgactactcacctttgcggctgaccatccacactctttgcacaagccac
tacctggacctcttcatcacctttatcatttgcattaatgtcttcacaatgagcattgag
cattacaatcagccacagtatttggaggaggttttgaagtactgcaactatgttttcacc
atcatcttcgtcattgaggctttgctgaaacttgtggccttcggcttccacaggttcttc
aaagacaggtggaatcaactagatgttgggatagttgccttgtctataatgggtatcact
ctggaagaactgaagatgaaagctgctttgccaataaatcctaccatcatccgaatcatg
agagtattgaggattgcacgagtgctaaaacttctgaagatggcaaaaggaatgagagct
ctgctggataccgtcatgcaggcgctgccacaggtgggaaatcttggtctcctcttcatg
ttgctcttcttcatctacgctgctctgggagtggagctctttggcaaactggagtgcagc
gatagcaacccatgtgagggcctaagtcgtcacgccacatttgagaatttcgggatggcc
ttcctcactttgtttcgagtttccacaggagacaactggaacgggattatgaaagacact
ttaagggagtgccagccacatgaaagccactgtttatcctacctaccctgggtgtctccg
atatactttgtcaccttcgtgctcatggcccagtttgttttggtcaatgtggtggtggct
gttttgatgaaacatctagaggaaagcaacaaggaagccaaagaggatgcagagatggat
gcagaaattgcattggaaatggaagaggagaggcaacgcagacaaagcacaggatccaac
aatagctctatgggagggacttatattgggccatgcccaaattcacttgaggaggaagaa
gacctgcagtacagcgatcaggaccagctgtcgtcaggcaagatgtctgtgtctaggatg
cattctttgccaaatgacagctatatgtttcaacctgtgcgccctgccagtgccccctat
cctttaaaggaggtagatgtcagttcccagtaccagcatgcagcctctgtagtgtcggtc
caatcccagccctgtgagagccgctctttgctgcaggttccagatgcatcccctcttcat
ccccagtctactccctccctcactttaccccgcattgccccgccaacacctggcccctca
ccacgggccctgcacagacagggggcagttaaagtcgattctgtggaatcccagagctgt
gagcaacaggagaggtccagctcagctcatctaccctcccgctcatcttcctctctctcc
ccattaccccctctgtgctcttcctcctcagccctccccccatgctccaaatctccctct
tctcttcctccatcgccatcctctctcctgcctctcccataccctccatcctttctactc
cctccacctccctcaccacgcctgccctctcgctccagcagtcttcgcaggcccagggcc
ccatctgccatttcactttcggacccggccgacgcagaggtgtatcatatcaccagctcc
gctcgccataggtggagggatgaggagggaggggaacaggacaacagaaggaaggcaggc
cgcagccactctctgtccccttacggctcgccacactccctagatttgattcccacgctg
ccccctccatccaacagaagcaccctcagtctgctcggggaaggatcgaaagacatcaag
aaaggctttagtgttgataaccatggcttcctggagaaacctcagtcagagccagcaggt
cccttggatgaacagcggcgtcactctatcgaggtttgcctcccaaaggccgtcataacc
actgacagccaaagttttacactggagacccaccggtcagacaaaggcactcaggccttt
ccagtgagggtgcaatcagttggtggtaggcaacgaaagaagaagacaagccctccctgc
atatccatccacccacctgtagaaaaggaacagcccctgctaccctcacctccaaagcta
gctgactgcagcatgatgcttcggcgcaggacaccatccaatgacttaacgctgcactca
gacacgcctgcagatgggcagctccgcacacagatgcaaacaccactaacaccaatccac
gtgccactggacgcacattcaccgtcacacacactgagcccatcaaagggatccacccag
acacacacacccccgcctcacatccccatcagcccaaatgtcttcattcaaccccatgca
cctcttctaccaaccgttatgcctttctcacagcctgtcatgaggcactcccccctcgca
ggagactgcatcccgttaccccggttcacctatgaccaaccacagtccaggtacacaggc
gagccagaatctgctgcctgctcttcccctttcaacaacagactgggaagcagtcctggt
tttagtgcaaagaatcggaggaccgcccagtga
DBGET
integrated database retrieval system
