Cyprinodon variegatus (sheepshead minnow): 107088100
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Entry
107088100 CDS
T06110
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04080
Neuroactive ligand-receptor interaction
cvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107088100 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107088100 (grin2a)
04082 Neuroactive ligand signaling
107088100 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107088100 (grin2a)
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107088100 (grin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
107088100
NCBI-ProteinID:
XP_015235529
Ensembl:
ENSCVAG00000015111
LinkDB
All DBs
Position
Unknown
AA seq
1549 aa
AA seq
DB search
MQGMKWFSIMSLSTKRSKRRSRRSSSYGSGGKSVLLSLALLVAVTVMADPVAAQKQRTGG
GSEKVPVLNIAVILGRTRYISDRDIRALWSKEDPIDVNVVTLLVNETDPKSIITHMCDLM
SGTKIHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGAS
IQQEALLMLNIMEEYDWHVFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVE
EDSRSQIMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNPEITPE
TFPSGMISVSYDDWDYPLEARVRDGLGIITSAAAAMLVEYGDIPEAKTSCYGPMEKTTKL
PPSALHKYMMNVTWDGRDLSFTEDGYQENPKLVVIVLNKEREWEKMGKLDNGSLTIKYPV
WPRFNSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGG
TYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAV
GSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVT
AMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKF
IVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGS
TERNIRKNYPAMHQYMVKYHQTGVVDALVSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVT
IGSGYIFATTGYGIALQKGSFWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMS
SQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGTPGLLFSISRGIWS
CIHGVHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSHMNSPKREFMHSAGPMIM
DMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDAN
PNTVEVAVSADTVQTNAKPQRTLWKKSTDTLRSMPPGPSPMPDMLMPDPRISMKTQRYLP
EDTAHSDISDCSSRGATYKDPENNKHLKPKDNLKKRSVTSKYPRDCSEVELSYLKTKQVS
SGTNQSGRGGGEKIYTIDSDREVSLHSDSVRYRESHGLAADDLDYPEIYSDHSDNFRKCE
QPIIHLNSSPMHHTDSDLLPDSAYSKSYSLKEKNLSLSPHESIDRYKQTHCRSCLSKVPA
SYPQGGSYVSAASATASGTRSPYNRCDACLHTANLYDISEDQLLGDPLLSPTLHHQEQQQ
PDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDADPGRPARSVSLKEKDRFL
DSASDSQYANLFGMRPYSGRLFSSGSKPMLFNNNLEESKRSKSLYPTHGSENPFLSHSLR
DDTSSRLVHGRSSSDIYKQLAVGSPALALGSAPIKTRNDANNLRSSIKSTSSYCSRDGRI
TNDMYNKEHVMPYSDNKTSAYPASRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggatgaagtggtttagcatcatgtccctcagcaccaaaaggagtaagaggagg
agtagaaggagcagcagttatggcagcggaggcaaaagtgtgctgctctccctggctctt
ctagtggcggtgacagtcatggcagacccagtggcagcccagaagcaacgtactggtggt
ggctcagagaaagtgccagtacttaacattgctgttatcctcgggcgcacgcgctacatt
tcagaccgggacatacgtgctctgtggagcaaagaggaccctatcgatgtgaatgtggtc
acactacttgtcaacgagactgaccccaaaagcatcatcacccacatgtgcgacttgatg
tcagggacaaagatccatggcgtggtattcggggatggcactgaccaagaggccattgcc
cagattttggattttatttcatcacagacactcatacccattttgggcatccatggaggg
tcttccatgatcatggctgacaaggatgtgaagtcaacattcttccagtttggggcttcc
atccagcaggaggctctgttaatgctgaacattatggaagagtatgactggcatgtgttc
tcaattgtcacgtcaaagtttcctggataccaggagttcataaacatcctaaagactaca
gtggacaacagttttgtgggatgggacctgcagaatatcatcactttggatgccgtggag
gaagacagtcggtctcagatcatgctcaagaaggtgcagtctccagtggttctgctctac
tgctctaaagatgaagcagtatacattttggaggaggcacgctctctgggcctgactgga
tttggttacatctggattgtgccatcactcaccactgggaaccccgaaataacaccagag
acatttccatcagggatgatttcagtgtcatatgatgactgggactatccactggaggcc
cgagttcgtgatggacttgggatcataacatctgcagcagcagccatgttggtggagtac
ggtgatattcctgaagccaagacatcctgttatggcccgatggagaagacaacaaaactg
ccacctagtgctctccacaagtacatgatgaatgtgacatgggatggcagagacttgtcg
ttcacagaggatggctaccaggaaaacccaaagcttgttgttatcgttctcaataaagaa
agagaatgggaaaagatggggaaacttgacaatggcagcctgacaataaagtacccagtg
tggccaaggttcaactcttttggcgatgccgagctggacgacaaccacctgtcgattgtc
accttggaagaaaaaccgtttgttattgtggaggatgtggaaaggctcaccggtacctgc
atgaggaattctgtgccctgcagaaagcatatcaaagacaacacaactgaggctggtggg
acatatatcaaaaagtgttgcaaaggtttctgcattgacattctgaagaagattgccaag
tatgtcaaattcacgtacgacttgtacctggttaccaatggcaagcatggcaagaagatc
aacaatgtctggaatgggatggtgggagaggtggtctataagaaagccgtcatggccgtc
ggatctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgta
gaaactgggatcagcgttatggtctcacgtagcaatggaacggtctcaccatcagctttt
ctcgagccattcagtgcatcagtgtgggttatgatgtttgtgatgctcctactggtgact
gcaatggctgtcttcatgtttgagtacatcagtcctcttggctttaacagaaacctggca
caaggaaaagatccccatggtccatcttttacaatgggcaaggccgtttggctgctgtgg
ggtctggtctttaacaactctgtgccagtgcagaatcccaaaggaaccaccagcaagttt
attgtgtcggtatgggccttctttgctgtcatcttcctggcctcctacactgctaacctg
gctgccttcatgattcaggaagaatttgttgaccaagttactgggctgtcagacaacaag
tttcagaatccatatgcatactcccctccgttccgctttgggactgtcccaaatggatcc
actgagaggaacatcagaaagaactaccctgccatgcaccagtacatggtgaagtaccat
caaactggtgttgtggatgcacttgtcagccttaaatcaggcaagctggatgccttcatc
tatgatgctgcagtgttgaactacatggctggaagggatgaagggtgtaagctggtcacc
atcggcagcgggtacatatttgctacaactggttatggcattgctctgcagaaaggttcc
ttctggaagcggcaggtggatctggccatcttggctatcatcggagatggtgaaatggaa
gaactagaagcccagtggctgacaggaatttgtcacaatgagaagaacgaggtcatgtca
agccagcttgatgtagacaacatggcgggggtcttctacatgctggccaccgcaatgggg
ctctcactcatcacatttgtctcggagcatctcttctactggaggttgagatactgcttc
accggagtctgctctggcacaccagggcttctgttctccatcagcaggggaatctggagc
tgcatccatggagtacacatcgatatgaagaaaaagacagaccttgacttcagcccccag
gacaaaatgcttaaactcattaagtctgcaaaacagatgaccaacatgtctaacctcagt
ggctcccacatgaactcgcctaaacgagaattcatgcactcagctggtcctatgatcatg
gacatgatggcagagaaaggcaacttcatttatgctgacaacagaagctatgctcccaaa
gatatgatctatggggacactggtgaccttcagtcttatcttgcaaatcgccacaaagac
cacctcaataattacatctttcagggtgggcagcatcccctgactctgaatgatgcaaat
ccaaatactgtagaggtagctgtgagtgctgacaccgtccaaacaaatgccaaacctcag
cgaacattgtggaaaaagtcaactgacacattgcgttccatgccaccgggaccatctcca
atgcctgacatgctaatgccagatccacgaatatctatgaagacacagcgctacctccca
gaagacactgcccattctgacatctcagactgttcaagcaggggagcaacctacaaggac
ccagaaaacaacaagcatctgaaacccaaggacaacttaaaaaaaagatccgtgacgtca
aaataccctagggattgcagtgaggtggagctgtcctacttaaagactaagcaggtcagc
agtggaaccaaccaaagtgggagaggagggggagagaaaatctacacaattgattcagac
agagaggtgagcctccattcagactctgttcgctaccgtgaaagccatggtcttgcagca
gatgatttggattaccctgaaatatattctgaccacagtgataacttcagaaagtgtgag
cagccaatcattcatctgaactcctcacctatgcatcacacggactcagaccttctccca
gactcagcttactctaaatcttacagcctaaaagagaaaaatctttccctttcccctcac
gaatctattgatcgctacaaacagacacactgccgttcttgcttgtccaaagtacctgct
agctacccacaaggagggtcatatgtctcggcagcatctgctacagcatctggaacaaga
tctccatacaatcgttgtgatgcatgccttcacacagctaacttgtatgacattagtgag
gaccagctacttggtgatcccttgcttagccccacccttcatcaccaggagcagcagcag
ccagatgaaatgtttggcctgtattggccccagacagatgggccacatgtccaaaaaaga
aaccgcttgaggctaagtcgtcagcactcatttgataacatcatgcttgaaaaacccaag
gatgcagacccgggccgaccagcacgcagcgtcagcctgaaagaaaaagatcgattcttg
gactctgcatctgactcccagtatgccaatctattcgggatgcgcccttactctggcaga
ctctttagcagtgggtctaaaccaatgctgtttaacaataaccttgaggaaagtaagagg
agcaaatccctctacccaacccatggctctgaaaaccctttcctcagtcactcactgagg
gatgacaccagcagcagactggtccatgggcgtagttcctctgacatttacaaacagctg
gcagtaggttctcctgcattggcactaggatcagctcctatcaaaacacgcaatgatgcg
aacaatcttcgttcttccattaaatccacttcttcatactgctcaagggatggacggata
actaatgacatgtataataaagagcatgtgatgccttactcagacaataagactagtgca
tacccagcctcaaggggtgtcctaaactcagcccagttcagcaataggcgggtgtataag
aaaattcccagtctggaatcagatgtttag
DBGET
integrated database retrieval system
