Cyprinodon variegatus (sheepshead minnow): 107088110
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Entry
107088110 CDS
T06110
Symbol
smyd4
Name
(RefSeq) SET and MYND domain-containing protein 4 isoform X1
KO
K24634
SET and MYND domain-containing protein 4 [EC:2.1.1.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107088110 (smyd4)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Zinc finger domain-containing proteins
MYND-type zinc finger domain-containing proteins
107088110 (smyd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_BSK1_C
TPR_12
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
107088110
NCBI-ProteinID:
XP_015235544
Ensembl:
ENSCVAG00000013451
UniProt:
A0A3Q2FV56
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MMDLPCTQWQDHVAQKWSGLDPKQKETFNSLREIDDVFKCALSLANQEDLDAVQLISAGY
LAKKDSREASKCRERGNCSFKAKDYKAAALHYSQGICFAPPSSEQLSLCYANRSAALYHL
QHYQTCLDDINRALNNGYPPHLSYKLQDRRTLCLSRLSVCEKTIKDPLSASANDDICSQD
VLMSSNGAHRFGICPKVSVGCSEEKGCHLVALKKITAGEVILSDRPFSLVLIPGTEKVKG
KKEREQGTQREMVLGTEHRRCHRCLAETLCPVACEGCSLSQYCSAACQQEAWEEHHQWEC
PLGADLTVMGLMAQLALRITLKARIKNIQIARRTIRDEQKMKEKYNPYLTVFHLLHHLEH
QSAALRFLFAVTVATLYLKLSKAAPLPIPWKLNEASSASGGSTDAGDTESSPELWVVGSA
VLRHMLQLRCNAQAVITLQEAGSQNSQVQSVEEIRIATAMFPTLSLLNHSCCPNTSLVFG
TGKAADPCVSQESAGFNHRLLGEGRLDRGVTVTVRAARVITPGEQVLHCYGPHSNRMRTR
ERQHLLQQQYFFLCECEACSIQEDQRKSSRKDSGLLCSKCKGALIREGGSGFTCSSLTCG
HQVSAADVNERLQEVRAALEKAVELMERDVPVEALHHLQRTRSQSGFILGEIHPLQGELA
DATARAYAAMGDWRNAATQLEQSTVATASQYGKDSLEVGQQLFKLAQLHFNGGARGPALS
VMSKVKPIFSLHCGPNCPELQELNAMEECLQGLTF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcttccctgcacgcagtggcaagatcacgttgctcagaaatggagtggactc
gatccaaagcaaaaggaaacatttaactccctgcgtgaaatagatgatgtctttaaatgc
gctttaagtctcgcaaatcaagaggatctggatgctgtgcaattgatctctgcagggtat
ttagcaaagaaagactctagagaagcctccaaatgcagggaaaggggaaactgcagcttc
aaggcaaaagactacaaggctgcagctctgcactattcacagggaatatgttttgctcct
ccaagttctgagcagctttctctgtgctatgcaaatcgctccgctgctctctaccatctg
caacactatcagacatgcctcgatgatatcaacagagccctaaacaatggctatccacct
catctttcatacaaactgcaggatcgtcgcactctctgcttaagccgcctctctgtatgt
gaaaaaacaataaaagatcccctcagtgcttctgcaaatgatgatatatgcagccaagat
gttctcatgtcatccaatggagcccacaggtttgggatctgtcctaaagtttctgttggc
tgcagcgaggaaaaaggttgccatctggtggctttaaagaagataacagctggagaggtg
attttgagtgacaggccattcagcttagtcctcatcccaggaactgagaaggttaaagga
aagaaagaaagggagcagggcacacagagggaaatggttcttggaacagagcacaggcga
tgtcaccggtgtttggctgaaactctctgtcctgtggcctgtgagggatgcagcctcagc
caatactgttcagctgcttgtcagcaagaagcctgggaagagcatcaccagtgggaatgc
ccactgggagcagatctcactgtgatgggtttaatggcacagctcgctctcaggataacg
ctgaaggcccggattaaaaacatccaaatagcaaggcggacaatcagagacgagcagaaa
atgaaagagaaatacaacccgtacctgaccgtgtttcacttgctgcaccatttagagcac
cagagcgctgctttacggttcctgtttgcagttactgtggccacgctttacctgaagctc
agcaaggcagctcctcttcctataccttggaagttaaatgaagcttcatcagcatccggt
ggatccacagatgcaggagacacagagtcgagcccagagctgtgggttgtgggaagtgca
gttctaaggcacatgctgcagctgaggtgtaatgctcaggctgtcatcactctgcaagaa
gcaggatcccaaaactctcaagtgcagtcagtggaggaaattcgaattgccacggcgatg
ttcccaaccctcagcctcctcaatcactcttgctgtcccaataccagcctggtgtttggc
accggaaaagctgctgatccctgtgtttcacaggagtctgcaggtttcaatcaccgtctc
cttggggaaggacgtctagataggggagttactgtgacggtcagggcagccagagtaatc
actcctggagagcaggttctgcactgctatgggccccacagcaatcggatgaggactcga
gaacggcagcatctcctgcagcagcagtactttttcctgtgtgagtgtgaggcttgcagc
atacaggaggaccagaggaaaagcagcaggaaggattcaggcctcctgtgttcaaagtgt
aaaggagctcttataagggagggaggaagtggatttacatgttctagtttaacctgtggt
catcaagtgtctgctgctgacgtgaacgaaaggctgcaggaagtcagagctgccttggag
aaagctgttgagctcatggagcgagacgttccagtggaagccctgcaccatctgcaacgg
actaggagtcagtctggatttatacttggagagattcatcctctgcagggtgagctggct
gatgccacagccagagcttatgccgcaatgggagactggagaaatgcagcaacccaactg
gagcaaagcactgtagctactgcctcccagtatggaaaagacagccttgaagtaggacag
cagcttttcaaattagctcagctccacttcaatggtggtgctagaggcccggccctctcc
gtcatgtccaaggtcaagcctatcttctccctccactgtggtcctaattgccctgaacta
caagaactgaacgccatggaggaatgtctgcaagggttgacattttag
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