KEGG   Cyprinodon variegatus (sheepshead minnow): 107088198
Entry
107088198         CDS       T06110                                 
Name
(RefSeq) protein bicaudal C homolog 1-B-like
  KO
K18756  protein bicaudal C
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvg03019]
    107088198
Messenger RNA biogenesis [BR:cvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107088198
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 KH_GLD-3_1st SAM_1 KH_Vigilin SAM_2 KH_GLD-3_3rd KH_NusA_2nd Sigma70_ner
Other DBs
NCBI-GeneID: 107088198
NCBI-ProteinID: XP_015235705
Ensembl: ENSCVAG00000011501
UniProt: A0A3Q2E1Q6
LinkDB
Position
Unknown
AA seq 883 aa
MEKSGSVSLAIAQPQQPELDSSLELDTAKTDRREEKEDEEDEKEGGRCAGEDARGQRLDP
EWVEERFRIDRKKLENMLYAPEQGGETGEKFFERVMRETSTQVKWPSKLKIGAKSKKDPH
VKVEGKRASVMEAKKKILEVLEPKVNKVTLKMDVAFTEHSHVIGKGGGNIKKVMEATSCH
IHFPDSNRHNAAGEKSNQVSIAGPIEGVEEARRRIRDLQPLSLTFDLPTSLVPQALPDAG
SPLIQQVAQTLGVSVSFRAVPPIPQTQTPFYGNSCTVWGLQGNSAAVKKATFILMELLLG
SEAQSGIVSSQLDVTAQQHLFLLGQSGANFLSLMHKTQTQIILPDLNAPQSPPSLLIQGS
PDGVFLARQQLMDCLPVCLMFDMREDGEENPCKLTQMMQNLGVFISVKPKVKQTSKSVVV
KGLERDITCIYEARRLLLGLDSCDTANINTANPDLISPGGGLANYWLDLLLQQLHLSEQG
SASTQTTEALTGTKPHPSPPPGLTSPNDEGRTGSKGTEGRQLEKILENEYHSDQSEEESI
KVVRMSSSDVCEGVNNISRVGLNGRRGSLQGPEISKTHSQGRRHSTGQALTYRLLGPEGG
LSERRNSLRRDAPQAQNVHADSSKAENFDYEKKKLLATRAMQKKPVVTEVRTPTDTWSGL
GFSKSMPAEAIKELRCISRRCYKPYLSANINPQQCWAAQTGKVCIGSDSENWRDRRGSTS
QLISSSSSSSPPFSSTPPPASFSAFSSSLNRGRNDKSLENSVSCCFSTKGESSCSQRSSS
PLMTEDLPELLSQLGLIKYIDLFEQQEIDYQTFLTLSDEDLKEVGVSTFGARRKMLIAIS
DLNKSRGRLLEAQTVRTGYLEGGASGRLPRILDADDAAQSNRW
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggagaagagtggctcagtttctttggccattgcacagccccagcagcctgaactggat
agtagcttagaactagacacagcgaagactgatcgcagagaggaaaaggaggatgaggaa
gatgaaaaggaaggaggaagatgtgctggggaggatgccagagggcaaagattggatcca
gagtgggtggaggagagattccggattgacagaaagaagctagaaaacatgctgtatgct
ccagaacaaggaggggagacaggagaaaagtttttcgaacgagtaatgagagaaactagc
actcaggtgaaatggccatccaagctcaagattggagccaagtcaaaaaaagacccccat
gtgaaggtggaagggaagagagccagtgtgatggaagctaaaaagaagatactagaagtg
ctggaacccaaggtaaacaaggtgactctgaagatggacgtagcctttacggagcattcc
cacgtcattggaaaaggtggtgggaacataaagaaggtgatggaggccacgtcctgtcac
atccacttccctgactccaatcgtcacaacgcggcaggagaaaagagcaaccaggtctct
atagctggacctatagaaggggtggaagaagccagaaggaggataagagacctacagccg
ctgtcactaacctttgacctaccaaccagcttggtaccccaggctctcccagatgcaggc
tctccccttatccagcaggtggcgcaaaccttgggagtcagtgtgagcttcagggctgtg
ccaccgatacctcaaacccagacaccattttatggaaactcctgcaccgtttggggactg
cagggaaactcagctgccgtcaagaaggcgacgttcatcctgatggagctcctgcttggt
tcagaggcccaaagtgggatagtgagcagccagctggatgttactgctcagcagcatctc
ttcctgctgggacagagtggcgcaaactttctgagccttatgcacaaaacccagactcag
atcatcctgccagaccttaatgctcctcaaagtcccccttcactcctcattcagggcagc
cctgacggagtgtttctagctcggcagcagctcatggattgcctgccagtttgtttgatg
tttgacatgcgtgaagatggggaggaaaatccttgcaagctgactcagatgatgcaaaac
cttggagtcttcattagtgtcaagcccaaagtgaaacagaccagcaagtcggtggtggtg
aagggtctggaaagggacatcacctgcatttatgaagcccgtcgtctgctcctaggactc
gattcctgcgacactgcaaacataaacacagcgaaccctgatctcatctcccctggtggt
gggctggcaaactattggctcgaccttttactacagcagctacatctctctgaacagggt
tcagcatctactcaaactacagaggctctgactggtactaagccccacccttcacctcca
ccaggcctcacttctccaaatgatgagggcagaacaggctctaagggaacagaaggtcgc
cagctggaaaagatccttgagaatgaatatcattcagatcaatcagaggaagagagcatc
aaggtagtgaggatgtcctcatccgatgtgtgtgagggagtaaacaacattagtagggtg
ggtctaaatggtaggagggggagtctccaaggtccagaaatcagcaaaacccacagccag
ggaagacgccattccacaggacaggcactaacatacaggttgttgggcccagagggaggg
ctgagtgaacggaggaacagcctgaggagagatgctcctcaggctcaaaatgttcacgct
gactcatcaaaggctgagaattttgactatgaaaagaagaaactgctggcaacaagagcc
atgcagaagaagcctgtggtcacagaagttcggacaccgacagatacttggagtggcctc
ggattttccaagtctatgccagcagaggctatcaaggagctccgctgcatcagcaggcga
tgctacaaaccttacctgagtgccaacatcaatccacagcagtgttgggcggctcagaca
gggaaggtttgcattggcagcgactctgagaactggagggacagacgtggatccacatct
cagctcatttcttcctcctcctcctcatctccacccttctcctccacaccccctcctgct
tctttctctgcattttcatcctcgctgaacagaggcagaaacgacaagtcattggaaaac
tctgtcagttgctgcttctccactaagggggagtcttcctgcagtcagcggagctcatca
cccctcatgacagaagacctgcctgagctcctcagccaactcgggctaatcaaatacatt
gatctgtttgaacaacaggagattgactaccaaacatttctcactctgtctgatgaggac
ctgaaagaagtcggggtatctactttcggagccagacgcaagatgttaatagccatctca
gatcttaacaagagcagagggagattgctggaagcacaaacggttaggactggctacctg
gaggggggagcaagtggcagacttccacgcatcttggatgcagatgatgcagctcagagt
aaccgttggtga

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