Cyprinodon variegatus (sheepshead minnow): 107088227
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Entry
107088227 CDS
T06110
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9-II-like isoform X1
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107088227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107088227
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
107088227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107088227
NCBI-ProteinID:
XP_015235737
Ensembl:
ENSCVAG00000011651
UniProt:
A0A3Q2CV24
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MFKMIQVICLTVLLPEVVLCAQGHFAQKLLNDLMENYSSALRPVEDTDRALNVTLQITLS
QIKDMDERNQVLIAYLWIRQTWHDAYLRWNKEDYDGLDVIHIPSSLVWRPDLVLYNKADD
DFSGPMDTNVKLRYNGELTWDAPAITKSSCVVDVSYFPFDSQECNLTFGSWTYNGNQVDI
IMGMDSGDLSDFVENVEWECHGMPATKNVIMYGCCSDPYPDITYTVLLQRRSSFYIFNLL
LPCFLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSESVPLIGKYYIA
TMTMVTASTALTIFIMNIHFCGAEAKPVPHWAKVLIIDYMSKIFFVYEVGENCASGSSAS
SSHYLQDDVVNSHIHANGKPRGHSSQEDHQGHRYPRSQPYKQQQQSRVKVQHHIRRDDGN
HLSRSGPNRYEGSIRKNTLSDYCVDQNPQDPTNDFKFPCCPEDEKPPPLGPTVTFGPCVF
CSFGSGFPNVDTKLVRNVEYIANCFREQKATCAKGAEWKKIAKVMDRFFMWIFFVMVFLM
SILVLGKAK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagatgatccaggtaatctgtttgacagtgctgcttcctgaagtggttctttgt
gctcagggtcactttgcccagaagctcctgaatgacctgatggagaattactccagtgcc
ctgcggcctgtggaggacacagacagagcgcttaatgtgacattacagatcaccctctct
cagataaaagacatggatgagaggaaccaggtgctgatagcttacctgtggattaggcag
acatggcacgatgcgtacctgaggtggaataaagaagactatgatggtctagatgtcatc
cacattcccagcagcctagtgtggaggcccgaccttgtcctctataacaaagccgatgat
gatttctcaggaccaatggacacaaacgtcaagttgcgctacaatggagagttaacttgg
gatgctcctgccatcaccaagagctcctgtgttgttgatgtctcctactttccatttgac
agccaggaatgtaacctcacctttggttcctggacatacaatggcaaccaggtagatatc
atcatgggcatggacagcggtgacctctctgattttgtagaaaacgtggagtgggaatgc
cacggtatgccggccacaaagaatgtgatcatgtacggctgctgttctgatccctaccca
gacatcacctacacagtgctcctgcagcgccgctcctccttctacatctttaacctgctc
cttccatgcttcctaatctccttcttggctcctctgggcttctacctgcctgcagactct
ggtgagaaggtttcccttggagtcacagttctccttgctctcactgtgttccagctcatg
gtggctgagagcatgccaccatcagaaagtgtgcctcttataggaaagtactatattgcc
acaatgactatggtaacagcctccacagcgctcaccattttcatcatgaacatccatttc
tgtggcgctgaggccaaaccagtcccacactgggcaaaagtgctcattattgactacatg
tcaaagattttctttgtctatgaagtaggagagaactgtgcttctggctcctctgcttcg
tcttctcactaccttcaggatgatgtggttaattctcacattcatgcaaatggaaaaccc
agagggcacagcagccaagaggaccatcagggccacagatacccaagatctcagccttac
aagcagcaacagcagagcagagtcaaagtgcagcaccacattagaagagatgacggcaac
catctctccagatcaggacctaataggtatgagggctccatccgtaaaaacacactgagc
gactactgtgtggaccaaaatcctcaagatcctaccaacgactttaagtttccctgttgc
cctgaagatgaaaagcctccacctctcggtcccacggtaacctttggcccctgcgtgttc
tgcagctttggcagtgggtttcctaatgtggacaccaagttagtccgcaacgttgagtac
attgctaattgcttcagagagcagaaggccacatgtgccaagggggcagagtggaagaag
attgctaaagtgatggacaggttcttcatgtggattttcttcgtcatggtcttcctcatg
agcattcttgtccttggcaaggcgaaatga
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