Cyprinodon variegatus (sheepshead minnow): 107088236
Help
Entry
107088236 CDS
T06110
Symbol
frmpd1
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107088236 (frmpd1)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
Other domain-containing proteins
FERM domain-containing proteins
107088236 (frmpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
FERM_f0
PDZ_6
FERM_C_FAK1
PDZ_2
Protamine-3
Motif
Other DBs
NCBI-GeneID:
107088236
NCBI-ProteinID:
XP_015235748
Ensembl:
ENSCVAG00000011879
UniProt:
A0A3Q2GI20
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MEENERCRSRSPARRTSRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSSQSFQAKL
TLQITRDPVLDRSTGHGFTLTTDAPLLVRDVAPGSPADGILYPGDQVLQINEKVMEDLSA
EQVENILRDLEDCINVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTTVKDIVLTLKEKLSMRVIEHFGLVLEQQYSIAK
LLLLHEDELIQKVVQKKDSHDYRCLFRVCFIPRDPSDMLQEDPLAFEYLFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRASIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISATQARLAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGLSQVINHKLNMISTLVEFSSISRVELLSESEKVSLLRISLHDMKPFALLMDSV
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRIPAEEGVCGRFAVIEGVCYESLSSY
VSRCCSDSDDSTDDDDPMDSQSYKGSDHTSTDWEERRREEEEKRKDEERKEREEHEGKQE
VKIIVTTEGKENESEEEEGATGSGLRKFNVVDEEMNLETSWYHTDLRVTSSFSSLSSSSL
STALEESSAAAKAPSRLDALRGSSPCEDPSNLSVHHPYLLDPKRQGPLRPTNLNYRGNDN
SFLCFAELSKDDFLPSPAGATSEDDDEEEEEEEEGDLGIHQLRRISKIPSSRDLRMIDST
PFERLPIKRKKKIPPKVPLRTSSIPGNKSAQAEHRLSKDEDGLFLTPSPNPKPALLLKDN
VSESEDEFFDAQERFTPPVPDLSDAELADRKNANRLSGTWNSLQSVSRKEPPSPLANKPR
SPKIKKESELLKDSTNQLFQHPSSPSKPSQKSEAKVKPPLAPKPQLPPKPQMIPPKSPQH
GRSYAQCNGDASGRLSSELLEMEPDTMEFKSVTLGGLPVSSSIITAVRCYKQPVTNTTPQ
NEENTIKKEILQKNKNLVCENGLQGIPNDNKIIEDKKETEKVDENVNGPNILTKGPPSSH
SVQRSNSGTKLAVPPPVPPKPTCSSSFHPLSLPASSPVSPTDPNKGIFKDTVSTPNGIHP
WSSRNGSIQSGPRRVSLSHESLSPKNADAPLTITTSPSSVDCKGVGGLESKEPGRSGSGS
DLRTSSSSLGGRLPASALRGRIQSLPWYMTRSQEILGNLDYPSTSSINGDTSGFGSGLSV
ASGLSDLNKTPVKDTDTVASKSGSKGSILDDGAEVVIATIRQAPEVSSHMKKASGTNGSH
PNLSFRDISPHSGCVSSEQPQSRTHSAVGLGGVTSMQIGGDSPTSSGADTTPPQQHRESC
GCHTVYANCFSGDTEEGVSFDEELTVYEFSRRIRPKPAQASSPTTPAPKPNILSLLKDNP
RPLSTFSTASSELSPLVSCPVSPTVSLSGRLRSLSNKNYGGLRGGFASLREDIDQLLLVL
DRDGLDQPQQHSKLETTDLNHNGTQDNMASGKSCTGVSPVIMTEPEKSLLQAEARRLASG
CQRATRVGWAPDEALRSLTTSFSALVQLSAACLKTNPCPGCEVCNKARLVDKDEDDDGQQ
PMEKLKEIVGLYREFVGAVETAGTGGVNGGRNVGSGQSQGEEDGVRLLAKRCTLLISSVF
ALTQLFRSRTLETTDTPGRVPLNF
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatgagcgatgtaggagcaggtctccggctcggaggaccagtcgggtgcag
caggtggtgggaaccataatacggcgtactcgggagtccctgagcagggaacgtctgctg
ggcgatggaaggtcgcagcgctctaacagtctgtccagtcagagcttccaggccaaactg
acgctgcagatcaccagagaccctgtcctggaccgcagcaccggacatggcttcactctc
accacagacgcccccctgctggtcagggatgttgctccaggaagccctgcagatgggatc
ctgtacccaggggaccaggtgctgcagataaatgaaaaagtgatggaggatttgagtgca
gagcaggtggaaaacatcttgagggacctggaggattgcatcaatgtcactattctgcgg
cacatgacaaatcccaagtcatccattatgtcagctgagaagagagctcgtctgaggagt
aatccagttaaagtgcgctttgcagaggaggtggtagtcaatggacacactcagggaaac
tctcttctcttccttcccaatgttttaaaagtctatctagagaatggacagaccaaggcc
tttaagtttgacaatacaaccactgtcaaggacattgttctgacactaaaggaaaaactc
tccatgcgagtgattgagcactttggtctggtactagagcagcagtatagcatcgccaaa
ctattgctactgcatgaagatgagctcattcaaaaggtggtgcagaaaaaagactcgcat
gattacagatgcctgttcagggtttgtttcattcccagagacccctcggacatgctacaa
gaagaccccttggcctttgagtatctctttttgcagagcgttggagatgtgctacaggaa
cgttttgccgtggagatgaagtgcaacacggcgctacgcctcgctgcactgcacatgcat
gagagacttgatagttgtggacaaacccgggcctctatcaagagcattacgaaggagttt
ggcctggacagctttatctcacccacactgctgagcaacatgagggagaaggacctaagg
aaagcaatcagctaccacctcaaaaagatccagtccctgcttgagccacggcagaaggtc
atatctgctactcaagctcgattggcctaccttactcagcttggagaacttatttcctat
ggtggacgctcttacacagctacaatgatgcttcaggacagggaagtgctggtcagcctg
ctggtaggagccaaatatggattgagtcaagtcattaaccacaagctcaacatgatatcc
accttggttgagttcagcagcatcagccgagtggaactgctatccgagtcggaaaaagtc
agcctgctgcgcatttcactgcatgatatgaagccatttgccttactgatggattctgtg
gcagccaaagacttagggtgtttgctgggaggctactgcaaactcctggtggatccaagt
gttaatgtcttccgtctggggcgcccgaaagtcagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaggttcgccgtaatagagggcgtgtgctatgaatccctatcaagttat
gtgtctcgctgctgcagtgattcagatgactcaacagatgacgatgaccctatggattcc
cagagttacaaaggctcagatcacacaagcacagactgggaagaaaggagaagagaggag
gaggaaaagaggaaagatgaagaaagaaaagagagggaagaacatgaaggcaaacaggaa
gtaaaaataatagttacaacagaaggcaaggaaaatgaaagcgaagaggaagaaggtgca
acaggaagtggtcttcgtaaatttaatgttgttgatgaagaaatgaacctggagaccagc
tggtaccacactgacctaagggtcactagtagcttctcaagcttgtccagcagctccttg
agcactgccctggaggaaagcagtgctgcagccaaagccccttctcgcttagacgctctt
cgcgggtcaagcccatgcgaagatccttcaaacttgagcgtccaccacccctacctactt
gatccaaagcgtcaagggccccttcgacccacaaatctgaactaccgtggcaatgataac
tctttcctctgctttgctgaactctccaaggatgatttcttgccaagtccagcaggcgct
acaagtgaagatgatgatgaggaagaggaggaggaggaagagggagacctgggcatccat
caactcagacgcatttctaagattcctagttcaagggatctgagaatgattgacagcaca
ccttttgaaagattgcccattaaaagaaagaaaaagattccccccaaagttccattaaga
acgagttctattcctggtaataaatctgcacaagccgagcatcgcttgtctaaagatgag
gacggcctttttcttactccctcacccaacccaaaaccagctcttttgttaaaggacaat
gtctcagaatcagaagatgagttttttgacgcacaggagagatttactccaccagttcca
gatctgtcagatgctgaactggctgatcggaaaaatgctaatcgcttgagtggaacctgg
aatagtcttcaatctgtctcaagaaaagaaccaccatccccccttgctaataaacctcga
tcccctaaaataaaaaaggaatctgagttgctaaaagactctacaaatcaactttttcaa
catccatccagtccctcaaagccgtctcagaaatctgaagctaaagtgaaaccaccactg
gcacctaaaccccaactacctcccaaacctcagatgattcctcccaagtcaccccaacat
ggacgatcatatgcccagtgcaatggggatgcttctggacgtttgtcttctgaacttttg
gaaatggagccagatacaatggagttcaagtctgtcacattgggtggattgcctgtctcc
tcttcaattattacagcagtgagatgttacaaacagcctgtaaccaacacaacgccacaa
aatgaggaaaacactattaaaaaggaaatcttacagaaaaacaaaaatcttgtgtgtgag
aatgggttacagggtattcctaatgacaataaaattattgaagataaaaaagaaacagaa
aaggttgatgagaacgtcaatggacctaacattttaacgaaaggtccacccagctcccat
tctgtccaacgctctaattcagggacaaagcttgctgttccccctccagttccccccaaa
cctacatgttctagcagttttcatcctttatcgctacctgctagctcccctgtctctcct
actgatccaaataaagggatttttaaggatacagtcagtacaccaaatggaatccaccct
tggagtagtcgcaatggcagcatccagtcagggcctaggagggtttctctgagccatgag
agcctatcacctaaaaatgcagatgcaccactcacaattaccacctcaccctcctctgtg
gattgtaaaggtgttgggggccttgaaagcaaagagcctggtcgatctggttcaggatcc
gatctgagaactagctcttctagtttgggaggaagactaccagcttctgctctgagagga
aggatccagtctttgccctggtacatgactcgttcccaagagattcttggaaatttggac
tatccctcaacaagttctatcaatggagacacctctggttttggctctggtttgtctgtt
gcaagtggcctatcagacttaaataaaacccctgtcaaggacacggatacagttgcatca
aaatcaggaagtaaaggaagcatcttagatgatggagcagaggttgtcatcgcaaccatc
agacaggctccagaggtaagttcacatatgaaaaaggcaagtggaacaaatggctcacac
ccaaatctgagtttcagagatataagtccacatagtggctgtgtttcttcagagcagcca
cagtcacgaactcactcagctgtggggctgggtggtgtaacaagcatgcagattggaggc
gactccccaacctcctctggagcagacactactcctccacagcaacatcgggagtcttgt
ggttgtcacaccgtttatgccaactgttttagtggagacactgaggaaggggtgagcttt
gatgaggaacttactgtttatgaattctctcgccgtatacgccccaaacctgctcaagca
tcttctccaaccacacctgctccaaaacccaacattctctcacttttgaaggacaaccct
cgaccactgtctaccttctccactgcatcctctgaactgagtccactcgtttcgtgtcca
gtttcccctacagtttcactcagtggtcgtctgcgttccctttctaacaagaactatggg
gggctaaggggtggttttgcctctctgcgtgaagacatagatcaacttcttctagtatta
gacagggacgggcttgaccagcctcagcaacactcaaaattggagaccacagacctaaat
cacaatggaacacaagacaatatggcttcaggtaaaagttgcacaggggtaagtcctgtc
atcatgacagagcctgaaaaaagtcttctccaggcagaggctcgtcgactagcatctgga
tgccagcgagcgacacgtgttggttgggctccggatgaggctctgcgttctttaactact
agtttcagcgccctggttcagctgtcagctgcctgcctgaaaacaaacccctgtcctggt
tgtgaggtctgcaataaagcaagactagttgacaaagatgaggacgatgatggccagcag
cctatggagaagttgaaggagatagttggtctgtatagagagtttgtcggggcggttgaa
acagctgggactggcggtgttaatggtggtagaaatgtggggtctggacagagtcaaggg
gaggaagatggcgtaaggctgctagccaaacgctgcactctgctcatctcatccgtattc
gcgctcacacaacttttccggtcacgcacactggaaaccacggacacacctggccgtgta
cctctcaatttttga
DBGET
integrated database retrieval system
