Cyprinodon variegatus (sheepshead minnow): 107088254
Help
Entry
107088254 CDS
T06110
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107088254 (trpc4)
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107088254 (trpc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
107088254
NCBI-ProteinID:
XP_015235784
Ensembl:
ENSCVAG00000009721
UniProt:
A0A3Q2E1H4
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKTYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMVLNYRDNANLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFITCVFIGLLYPVFALCYLIAPKSRYGLFIR
KPFMKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPPPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGNKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASEEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDPDHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATVP
PPFNIIPSPKTFWYLMCWIKRQVCKRTLTKRTESFGTLGRRAAENVRINHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEDNFKELKQDISSFRYEVMGMMKTGKPALQGAMASCSSVESS
LAYPNSSLKISAGLPASQGKGKLNRFKIAASILKQASSLASPRTSEASNGLLNGLLASDE
GCSGPSSQLRNCSKDISEFALFQKRHWSSKEVPSGSGDVLREMYSLSEEAGESESSDIEE
QSKEITTKTEEETLVNKLGEEFPENKKELKINNSLECEDKETGDKEKNPGSPRKDG
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtattaccggaggactgacagctcttcatatcgggaccgcatcccgttg
cgaattgtgcgggcagagtcggagctgtcgcctttagaaaaaacctacctaggagctgtg
gagaagggggactacgccagtgtcaaacaagccctggaggaggcagagatctacttcaag
atcaacatcaactgtattgaccccctcggccgcacggctctgctcattgccattgagaat
gagaatctggaaattattgagctcttgctgagtttcaatgtctacgttggcgatgccctg
cttcacgctatccgcaaggaagtggtgggagctgtggagctgctgctaaatcataagaaa
cctagtggtggtatgcaggtcccccctatcttattggacaagcagttttctgacttcacc
cctgacatcactcccatcatccttgctgctcacaccaataactatgaaattatcaagctt
ctggtgcagaaaggtgtgtctatgccacagccacatgaggtgcgctgcaactgcgtggag
tgtgtgtctagttcagacgtggacagcctacggcactctcggtctcgcctcaacatctac
aaagcactgtcgagtccctctctaattgcgctctccagcgaagatccctttctcactgca
ttcaggctcagctgggagctgcaggagctcagcaaggtagagaatgagttcaaatccgag
tatgaggagctatctcagcagtgtaaacagtttgctaaagacctcctggaccaaacgagg
agctccagagagctggaaatggttcttaactaccgggacaatgccaacttactggaagag
gagggtaacaatgaccttgcaagactcaaactagcaatcaagtaccatcaaaaggagttc
gtggctcagccaaactgtcagcagctacttgcatcccggtggtatgatgagtttccaggg
tggaggcgacgccactgggcaggaaaattcatcacctgtgtgtttatcggcctcctctac
cctgtttttgccctctgttacctcatcgctcccaagagtcgctatggcctctttatccgc
aaacccttcatgaagtttatctgccacactgcatcgtacctgacctttctgttcctgctg
ctgctcgcctcccagcacattgtcaccacagaacaagataggcaggaccgacagggccct
ccacctactactgtggagtggatgatactaccatgggtgctaggatttatttgggcagag
ataaagcaaatgtgggatggtggtttccaggactatgttcatgactggtggaacctgatg
gactttgtcatgaactctctttatttggccactatatctctcaagattgtagcgtacacc
aagtacagtggtaataaaccaaggaaccaatgggaaatgtggcaccccactttagtagct
gaggcagtgtttgccattgcaaacatatttagttccctgcgtctcatctctctcttcact
gctaattcccacttgggacctctgcagatctcacttggacgaatgctgctggatattctg
aagttcctttttatttactgtttggttcttttggcatttgcaaatggtcttaatcagctc
tacttttactatgagacaaaggcttcagaagagaaagggaaatgcaaggggatccgctgt
gtagagcagaacaacgctttttccacgttatttgagaccctgcaatcacttttctggtct
atatttggactgatcagcctctatgtgaccaatgtggatccagaccaccagttcactgaa
ttcgtcggagccaccatgtttggcacatacaacatcatttctctggtggtgctcctcaac
atgctcatagccatgatgaacaactcctaccagcacattgctgaccatgcagatatcgag
tggaaatttgccaggacaaagctgtggatgagttactttgaggagggggccaccgttcca
ccccctttcaacattattccgagccccaaaacattctggtacctgatgtgttggattaag
agacaagtttgtaagaggacactgactaagagaaccgaaagctttgggacacttggaaga
cgagcagcagagaatgtgaggataaaccatcaatatcaggaggtattaaggaacctggtg
aaacgttatgtggctgcaatgatcagagatgctaaaacagaggaaggcctgactgaggac
aacttcaaggagttgaagcaagatatttccagcttccgatatgaggtaatgggcatgatg
aagacaggaaagcctgctctacagggtgcaatggccagttgcagttcagtggaatccagt
cttgcttatcctaattcttctctcaagatctctgctggccttccagccagtcagggaaaa
ggcaagctcaaccgattcaagatcgctgcatccatcctcaaacaagccagttctctagct
tcacccaggacctctgaagcatccaacggtcttcttaatgggctattggcctcagatgag
ggctgcagcggaccttcgagccaactgagaaattgctccaaagatattagtgaattcgct
ttgttccagaaacgtcactggagcagtaaagaagtcccttcgggctcaggggacgttttg
agagaaatgtactctctgtcagaggaagccggggagtcagagagctcagacatagaggag
cagagcaaagaaattaccactaagactgaagaagaaacactggtgaataaactgggggaa
gagtttccagaaaacaaaaaagagttaaaaattaacaacagcctcgaatgtgaagataaa
gaaactggggacaaggaaaaaaatccaggctccccaagaaaggatggataa
DBGET
integrated database retrieval system
