Cyprinodon variegatus (sheepshead minnow): 107088356
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Entry
107088356 CDS
T06110
Name
(RefSeq) ras/Rap GTPase-activating protein SynGAP-like isoform X1
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
107088356
NCBI-ProteinID:
XP_015235962
Ensembl:
ENSCVAG00000006316
LinkDB
All DBs
Position
Unknown
AA seq
1284 aa
AA seq
DB search
MDTSSKTWLPHQGQFGLVGQAEVCCGGPGVLTPNQSRRASFASVRQSSMETPPNTTPQPF
RQPSFLNRRLKGSIKRAKSQPKLDRTSSFKQMILPRFRSADQERTRLMQSFKESHSHESL
LSPSSAAEALDLVLDEDAIIKPVHSSILGQEYCFEVTTNSGTKCFACRSASERDKWIENL
QRAVKPNKHSFQDNSRRVENVLKLWIIEARDLPAKKRYYCELCLDDMLYARTTSKPRTDT
VFWGEHFEFNNLPTIRSLRLHLYKETDKKRRKEKSTYIGLVSIPISSITGRQFVEQWYPV
IQSSVLAKSGGVGSTKVINASLRIKSRYQTMNILPMELYKEFAEYITNNYRTLCAVLEPL
LSVKSKEEVAFALVHILQSTGKTKEFLSDMAMCEVDRFMDREHLIFRENTLATKAVEEYL
KLIGHRYLKEAIGDFVRALYESEENCEVDPMRVPPSVLADHQANLRMCCELLLCKIINSL
CIFPRELKEVFASWRARCAERGREDLADSLISSSLFLRFMCPAIMSPSLFNLMQEYPAER
TSRTLTLIAKVMQNLASFTKFGPKEEYLYFMNEFLEMEWGSMQQFLYEISNMDTGGNAGG
FEGYIDLGRELSMLHSLLWEVMGQLSKDAILKLGPLPRLLNDISVALRNPQLHMPTNHQP
ERPKDRLFSRPSFNRLMSSDFQSLMMRDLNSSIDISRLPSPTTGVSAVESLSSNLNMRRQ
AERDLRSSSREVFYVTRPPLARSSPAYCTSSSDITEPDPKVHSVNKSVSMMDLQDSRMNS
ISNLNSVGDMLASSQASIAGLGHSFGNLGAPLRMGGHLPPGSSGSGLRLSQMGHVGAPTE
SISQQQQQAAAAMHFPLSFQNPLFHLAAQNSPAQSQAPPPAAIPPPLLLTPEAENGHPDY
PPAFGNSAFSRSEDLSALQSQSSLVQPSIVHSHSYSDDFTRQNQNNDYAWHQLSLQVQES
LQQHHLMGVTSQSGTGTGTPASLATPPTTVHPSRQSSIAAQHLKSQRSINTPATATPPKA
RPQSRNLLLNSSDPSFSGSQPKSRPTKQTTQQQQQQQQQPVQQDGQLSVTDSPAPGLPFQ
TSSAKENQAPSAAAEESTDTPTKSSKKSQQSQLQPPQQHLLKPVANKQGNSPGMNERTVA
WVSNMPHLSADIESLRPDREGQLKEYSKSMDESRLERVREYEEEIHSLKERLKMSHRKLE
EYEQRLLSQEQQTSKILQQYQCRLEDSERRLKQQQLEKDSQITGIISRLMAVEDELRGGA
MPDIKPRILTDQSLSQVYGGLPGS
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcgtcaaagacgtggctgccgcatcagggtcagtttggcttggttggtcaa
gcggaggtttgctgtggtggaccaggagttttaacgccaaaccaatcccgcagggcaagt
tttgcctctgtgagacaatcgagtatggagacccctcctaacacgacacctcaacccttc
aggcagccgagttttctcaatcgaaggctgaagggttccatcaagagggcaaaaagtcag
ccgaaactggacagaaccagcagcttcaaacagatgattctgccccggtttcgtagtgct
gaccaagagcggactcgcttgatgcaaagcttcaaagaatcccactcccacgagtccctc
ctctcccccagcagcgctgcagaggctctagatctagttctggatgaagatgccattatt
aagcctgtccattctagcattttaggacaagagtactgctttgaggtaaccaccaattca
gggacaaaatgttttgcctgccgatcagcttcagaaagagacaaatggattgaaaatctt
caaagagccgtcaaacctaacaagcactcttttcaggacaacagcaggcgagtagagaat
gtactcaagttgtggataatcgaggcccgagatcttccagctaagaaacgctactattgt
gagctgtgtctggatgacatgctgtatgcacgcaccaccagcaagccacgcaccgataca
gtcttctggggagaacattttgagtttaacaatttgccgaccattcgtagccttcgtttg
cacctctacaaagagactgacaaaaagagacgcaaggagaaaagcacatatattggccta
gtcagcatcccgatatccagcatcacaggccggcagtttgtggagcagtggtacccggtg
atacagtccagtgttttagccaaaagtggtggtgttggtagcaccaaagtgatcaatgct
tcactacgcatcaagtctcgctaccagacgatgaatattctaccgatggagctgtacaag
gagttcgccgaatacattacaaacaactaccgaacactgtgtgcagtattggagccgctg
cttagcgttaagagtaaagaggaggttgcatttgctttggtccacattcttcagagcaca
gggaaaacaaaggagtttctttcagacatggcaatgtgtgaggtggatcggttcatggac
cgtgagcacttgatcttccgggagaacacacttgctacaaaagcagtggaagagtacctc
aaactaataggtcacagatacctcaaggaagctattggtgattttgttcgagccttatat
gaatctgaggagaactgtgaggtggacccaatgcgtgttcctccgtcagtccttgctgac
caccaagccaaccttcgcatgtgctgcgagcttttactctgcaagatcatcaactccctc
tgcattttccctcgggagctgaaggaggtttttgcctcctggagagccagatgcgccgag
cgagggagagaggatctcgccgacagcctcatcagctcctccctgttcctccgctttatg
tgcccagccatcatgtcgccatccctgttcaacctgatgcaggagtacccggctgagcgc
acatcccgcaccctcacgctcatcgccaaagtgatgcagaacctggccagcttcaccaaa
tttggacccaaagaggaatacttgtatttcatgaatgagttcctagagatggagtggggc
tccatgcagcagttcctctatgagatttccaacatggacactggaggaaacgctggaggc
tttgagggctacatcgacctcggcagggagctgtccatgctgcacagcttgctatgggaa
gtcatgggacagctcagcaaggatgctatcctcaaacttggacccctgccgcgactgctg
aacgacatcagtgttgccctgagaaatccgcagctccacatgcccacaaaccatcagcca
gagagaccgaaggacagactcttctcccgcccatccttcaatcgccttatgtcctctgat
ttccaaagcctcatgatgcgtgatttaaacagctccatagacatctcccgcctcccttcg
cccacgactggagtctcagctgtagaatccctctcatccaatctgaatatgaggcgtcag
gcagaacgagacctccgctcttcgtccagggaagtgttctacgttacccgcccacctctg
gctagatccagccccgcatactgcaccagcagctctgacatcacagaacctgatccaaag
gtccacagtgtaaacaaaagtgtctccatgatggaccttcaggactctcgaatgaacagc
atctccaacctaaactctgttggagacatgctagcctcttctcaggcctccattgctggc
ctcggccacagctttgggaacctgggcgctcctctgcgtatggggggtcacttgcccccg
ggttcatccggttctggccttagactgagccagatgggccacgtaggagctcccacagaa
tcaatctcccagcagcaacagcaggcagctgcagccatgcatttccccttgtctttccag
aatccactattccatctggctgcccagaactccccggctcagtcccaagctcctccccct
gccgccatccctcctcctctgctcctgacccctgaggctgaaaacggccaccccgactac
ccacctgcctttggcaacagtgctttctcccgcagtgaggacctttctgccctgcagtca
cagagcagcctggtgcagcccagcatcgttcactcccacagctacagtgacgacttcact
cggcagaatcagaacaacgactatgcctggcaccagctgtctctgcaagtacaggagtct
cttcagcaacaccatttgatgggagtcacatctcagtctggcacaggcacagggactcct
gcttccctggctacacctccaacgaccgttcatccatcccgccagtcatccatcgccgcg
caacacctcaagtcccagcgctccattaacactccggccactgccacgcctccgaaggct
cgtccacaaagcaggaacctcctccttaattcctcggatccaagcttcagtggcagtcag
ccaaaatcccgcccaacgaagcaaacgacacagcagcaacaacagcaacaacagcaaccg
gtacagcaggatggacagctgtctgtcacagacagtccagctccaggacttcccttccag
acaagctctgctaaagaaaaccaggctccatcagcagctgcagaggagtctacagacacg
cccacgaaaagcagcaagaaatctcagcagtcacagctgcagccgccacagcagcatctg
ctgaaaccggttgcaaacaaacagggtaacagcccgggaatgaatgagcggacagttgcc
tgggtgtccaacatgccacacctctctgcggacatcgagagcttgcggccggaccgcgag
ggccagctaaaagagtactctaagagtatggatgagtcacgactagaaagggtaagggaa
tatgaagaggaaattcactctctgaaggagcggctgaagatgtcgcatcgcaaactggaa
gagtatgagcagaggcttctgagccaggagcagcagaccagcaagatcttgcagcagtac
cagtgtcgcctggaagacagcgagcggcgcctaaagcagcagcaactggagaaggactct
caaatcacagggatcatcagcagactcatggctgtggaagatgagctgagagggggtgcc
atgcctgatattaagccacgaatcctcacagaccagtctctcagccaggtatatggggga
ctccctggatcctga
DBGET
integrated database retrieval system
