Cyprinodon variegatus (sheepshead minnow): 107088393
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Entry
107088393 CDS
T06110
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00900
Terpenoid backbone biosynthesis
cvg01100
Metabolic pathways
Module
cvg_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107088393 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cvg01006
]
107088393 (fdps)
Enzymes [BR:
cvg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
107088393 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
107088393 (fdps)
Prenyltransferases [BR:
cvg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
107088393 (fdps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
107088393
NCBI-ProteinID:
XP_015236018
Ensembl:
ENSCVAG00000022619
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MRRLMLNCAVNAHKTFRIRWLVSSTSQFKRSFMQCTSALQGDTVCNGTQGKKLLLDSQLF
DAKFEELVTELTEGDLQDLGVADALSRLKEILRYNVPGGKKNRGLSVIASLRELLPASQL
TQDAVQKALLVGWCIEMLQAFFLMADDIMDASVTRRGQPCWYKRDGIGLDAINDSFLVES
SIYRLLLRQCRDQPYYVHLLELFNETTFQTELGQTLDLITAPPGQIDLNRFTMERYKAIV
KYKTAFYSFYLPVASAMYMAGIDSEEEHNNAKHILLEMGEFFQIQDDFLDCYGDPAVTGK
IGTDIQDNKCSWLVVKALEVMTPQQRSVLEACYGRKDEASVAKVKELYNSLQMPMLYHTY
EEESYQRLQKLIAQHAQNLPHAIFLNFAKKIYKRNK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcttgatgttgaactgtgcagttaatgcacataaaacctttaggatcaggtgg
ttggtttcgtctacttctcaatttaaaaggtcatttatgcagtgtacctccgccttacag
ggggacacggtttgcaatgggacacaggggaagaagttgcttttagactcgcaactgttt
gatgcgaagtttgaggagctggttacagagctgacagagggggacctccaggatctcggg
gtggccgatgctctaagcaggctaaaagagatattgaggtacaatgttcccggaggcaag
aagaacagaggattgtctgtgattgcctccctgagggagcttcttccagcctcccagctc
acccaagatgcagtacagaaagctttgctggttggctggtgcatagaaatgcttcaagcc
tttttcctcatggctgatgacatcatggatgcatctgtgactcgaagaggacagccctgc
tggtataagagggatggaatagggctggatgcaataaatgattctttccttgtcgagtca
tcaatatacagacttcttctgaggcaatgcagggatcagccctattatgtccatttactg
gagctttttaacgaaaccacgtttcagactgagcttggtcagacgctggacctcataact
gctccacccggtcagattgacctgaacagatttaccatggaaaggtataaggccattgtg
aagtacaagactgccttttactctttttatctcccagtagcctctgcaatgtacatggca
ggaattgatagtgaggaggaacacaacaatgcaaaacacatcttattggagatgggagag
ttcttccaaatacaggatgacttcttggactgttatggtgaccctgcagtgactggaaag
atcggaacagacatccaggacaacaaatgcagctggttggttgtgaaggctctggaagta
atgactcctcagcagagatctgttttagaggcttgctacggccgcaaggatgaggccagc
gtggcaaaggtcaaagagctctacaactccctccaaatgccaatgctgtatcacacctat
gaagaggagagctatcagcggctgcagaaactcatcgctcagcatgctcagaaccttcct
cacgccatcttcctcaactttgccaagaagatttacaagaggaacaaatga
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integrated database retrieval system
