Cyprinodon variegatus (sheepshead minnow): 107088418
Help
Entry
107088418 CDS
T06110
Symbol
rnf115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107088418 (rnf115)
04121 Ubiquitin system [BR:
cvg04121
]
107088418 (rnf115)
Enzymes [BR:
cvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107088418 (rnf115)
Membrane trafficking [BR:
cvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107088418 (rnf115)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107088418 (rnf115)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
Zn_ribbon_19
zf-RING_5
zf-Nse
C1_2
zf-ANAPC11
zf-C3HC4_3
HypA
Motif
Other DBs
NCBI-GeneID:
107088418
NCBI-ProteinID:
XP_015236060
Ensembl:
ENSCVAG00000022495
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVNPKLPEYICPRCDSGFIEEVTDDSSLLEGGANGIDDTAT
QFAELWHLLLLERPFTTDRDSPDSDHRIRGERLMGFGDLGGLGGGSIGGSVPTGLGGSMG
GLLGSGDNWGQGRPPRLNSQRRYRSRGSSRPDRSPAVEGSLSDRIVQQFLAGLFANSGVP
GSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQLENTGPPPAEKEKISSLPTVSITQE
QADCCMECPVCKEDFAVGEPVRQLPCNHFFHSGCIVPWLEMHDTCPVCRMSLNGEDSSSQ
PSSESPSLSTDPRTQERWSF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggctgttcccccgcatcggtttttctgtcattgttgtaagggagaa
gtaaaccctaaactcccagaatacatctgtccaagatgtgattcaggtttcatagaggaa
gtaacagatgactccagtctcctagagggtggcgctaatgggatagatgacacagccaca
cagtttgcagagctatggcatctcttgttgctggagcgaccgtttaccacagacagagac
agtcccgactctgaccatcggatccgcggagaacgcctgatgggctttggtgatctgggg
gggttgggaggtggatcgattgggggatctgtcccgacaggcctaggaggatccatgggg
ggcctgctaggatctggggacaactggggacaagggcgtccccctcgtttaaacagccag
aggagatacaggtccagaggcagcagtcggcctgatcgctccccagctgtggaaggttct
ctctctgacaggatcgtacagcagtttctagctggactctttgccaactctggagttcct
ggctcacctcctctgtcatggacagggatgctgcactctaacccaggagattatgcatgg
gggcagggagggttagatgctgtcataacacagttactaggtcaactagagaacaccggc
ccacctccagcagagaaagagaagatttcttccctcccgactgtcagcatcactcaggaa
caagcagactgctgtatggaatgcccagtgtgcaaagaagactttgcagtgggagaacca
gtcagacagctaccctgtaaccacttctttcactcaggctgtatagtaccatggctggaa
atgcatgacacgtgtccagtgtgtcggatgagtttgaacggagaagacagcagcagtcag
ccctcatcagagtccccctcgctctctacggacccccgcacacaggagagatggtccttt
tga
DBGET
integrated database retrieval system
