Cyprinodon variegatus (sheepshead minnow): 107088552
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Entry
107088552 CDS
T06110
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvg04121
]
107088552 (wdtc1)
Ubiquitin system [BR:
cvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107088552 (wdtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
TPR_19
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_2
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
ANAPC3
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
TPR_1
TPR_17
TPR_6
TPR_16
TPR_9
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
107088552
NCBI-ProteinID:
XP_015236291
Ensembl:
ENSCVAG00000020036
UniProt:
A0A3Q2DDN6
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MAAANITREILHRQIRDKRTSGFQRCFHVTDPFIKRLGLEAELQGHTGCVNCLEWNEQGD
LLASGSDDQHAIIWDPFRHKKLTTMHTGHAANIFSVKFLPHTGDRILVTGAADTKVHVHD
LTVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRENSKHSEVLIDLTEF
CGQLAEAKCLAVNPRDNNYLAVGANGPFVRLYDIRMIHNYRKSMSQNTSAAVQTFCDRQK
PIPDGAGQYYIAGHLPVKLRDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTSK
QRPYTFVLPKLCQSSADVQNGKTTNGVSNGIHLPPGHIHFSESKTQSSSAELPPHLEKIK
QQANNAFARQQWTQAIQLYSLGIHEARGNAMLYGNRAAAYMKRKWDGDHYDALRDCVKAL
ALNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKAALYSK
SDSDDKKANSSIRFHSFSRKESIPDDEITLREHSFDYKHRYCGHCNTTTDIKEANFFGSK
GQYIVSGSDDGSFFIWEKETTNLVRILQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNP
RPETDGDNGRVVEDMEGAAQANQRRMNADPLEVMLLNMGYRITGLRGVGPDGSDDEDSSD
GPVQCRTS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccaacatcaccagggagattctgcacaggcagatcagggacaagaggacg
tctggctttcagaggtgttttcatgtcaccgatccctttattaaaagacttggattggaa
gctgaacttcagggccataccggctgtgtgaactgtttggaatggaacgaacaaggagat
ctgctggcttcaggctcagatgatcaacatgccatcatctgggatccattcagacataag
aagctcacaaccatgcacacgggtcatgctgcgaatatattttctgttaagttcctccct
cacactggggacaggatcttggtaacaggtgcagccgacacaaaggtccatgtccacgac
ctgaccgtgaaggaaaccatccatatgttctctgatcacactaatagagtgaaacgtatc
gccacggcaccaatgtggcccaacaccttctggagtgctgcagaggatggcatcatcaga
cagtatgatctgcgcgagaacagtaaacactctgaggttctgattgacctgacagagttt
tgtgggcagttggctgaggccaagtgcctcgcagtgaatccgcgggacaataactaccta
gcagtgggagccaacgggcctttcgttcgcctctatgacatcaggatgattcacaactac
aggaaatctatgagtcagaacacttcagcggctgtgcaaacgttctgtgacaggcagaag
cccatcccagatggggctgggcagtactatatagcaggccatctgccagtgaaactcaga
gactacaacaaccgcctgagggtcctggtggccacctatgttaccttcagccccgatggc
acagagctgcttgtgaacatgggtggagaacaggtctatctttttgacctgacgtcaaag
cagaggccatatacctttgtgcttccaaaactgtgccagtcatcagcagacgtccagaat
ggaaagacaaccaacggcgtctccaatggcattcatttaccaccgggccacattcacttt
tctgaaagcaaaacgcagtccagctctgctgagcttccccctcacttggagaaaataaag
cagcaggccaataatgcgtttgcccgccagcagtggacacaggctatccagctgtatagt
ttaggcattcatgaggccagaggcaacgccatgctttacgggaaccgggctgcagcctat
atgaaacgcaaatgggatggagaccattatgacgcccttagggattgcgtgaaggctctg
gcactgaacccgggacatctgaaagcacatttcaggctggcacggtgtctgtttgagctg
aaatatgtggccgaggctctggaatgtctagacgatttcaaagggaagtttcctgagcaa
gcacacagcagtgcctgcgacgctttggataaagatatcaaggctgctctatactccaag
tctgattcagacgataaaaaggccaacagctccattcgtttccactcgttcagtcgtaaa
gagtccattcctgatgacgagataactctgagggagcacagttttgactacaagcacaga
tactgtggccactgcaacaccaccacggacattaaagaggccaacttctttgggagcaaa
ggccagtatatcgtgagtggctcagatgatggctcatttttcatctgggagaaggaaacg
actaacctggtgaggatccttcagggagatgagtcaatagtcaactgcctccagccccac
ccaagctactgcttcctggccactagtggtatcgaccctgtggttcggttatggaacccg
cggccagagaccgatggtgacaatgggcgtgtggtggaggacatggagggagcagctcag
gcaaatcagcggcgaatgaatgcagatcctttggaggtcatgctcctgaacatgggttat
cgcatcacaggcctgcgcggcgttggacccgacggttctgatgatgaagacagctcggac
ggaccagtacagtgcaggacaagctaa
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