Cyprinodon variegatus (sheepshead minnow): 107088566
Help
Entry
107088566 CDS
T06110
Symbol
triobp
Name
(RefSeq) TRIO and F-actin-binding protein isoform X1
KO
K23751
TRIO and F-actin-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvg04812
]
107088566 (triobp)
Cytoskeleton proteins [BR:
cvg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
107088566 (triobp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
Motif
Other DBs
NCBI-GeneID:
107088566
NCBI-ProteinID:
XP_015236316
Ensembl:
ENSCVAG00000004415
LinkDB
All DBs
Position
Unknown
AA seq
1660 aa
AA seq
DB search
MSHSSDEPTCPKFQPNIFDPSRCHECLRQKHLHTSVAERTEPQHQEKPLPQDGDKTEKSA
GVGREVGSSGRALLTPISSQAEEGDTSSSCKEDSDSVSVVSSYCDVSRGQAGNVETSLCI
LSPDCKLYICEDDNSTDSCREQSEEFSCSVSTDDEYLPIRRQPTKLRMTRLDPPPHRPNP
RQAWMEETRGGGSFSRGSDVKEDREKRESGYYSLGRAAGARFNEKSQPTPFRHFERGHPI
FSHRNIEPKDTIPFRNPNLGVASERPIPDVFSEDLTADIPPPDPYEVAVEVEAQVGPRSP
SPTPFKIAESLASTGRKGLRGGYNSSTQGSALHSRSSSPSRENLQLRHREPSSILNRTNF
DGGGWSQRQMDRSSLSIQGSQGRRFESGTLPKNFKSFPSMSQSSTVSDFRNALRKTEADC
SLKGTDYVKRSSSPSRREYASSFKMSPNTEVNTSWTHRISSPSRTYDHMQESRTSSSPRR
NLNSSSHSLGRSESNISLNERSHHQRSGSPVSSRPPRSNFNSSSHSLRKSESITSLNERS
THRRSGSPVSSTLPSRNFNSSRHSLRKSESTTSLNERSHHQHSGSPVSSRPPRTTFNSSS
HSLRQSESITSLNERSNHQRSGSPVSSKPPRSNFNSSSHSLHQSESMISLNERSNHQRSG
SPVSFMQPKGNLRSTSPSFHHKSTKSITSLNERSHHRRCGSPVREGYGIEGQAQLRNLAT
RNGLMDQEREVTVSSSSHDSDRPRQSILKKPESSTVSGSRSWGSRSSSPSKRGQETFAQG
RHNSGGSVNGHVHEKRKSSVSGKNFDSTFKSQQQKTETASSIRSHDNESSLALRGTHYAS
DYHSSGNMRTGSSFNSKYLHTSRTPSPSRKGNNDPPGYSVLRSATKGDANGSFETKNTSG
KSKYDSHSSSLSQRGSTHSRHGSSLSRATSPSRKSVNNNKDAHVTLESSRSSSSMRSRIG
TYGHDDQPLHEKRSSHYARSPSPSQQIQMHSSSQSSMESTESGQVSVGSTGRNREEYAAM
ADLPKVKIIHQREGPSHVGRPQSHQPVRRQELFKPASHSLSRHPSIEWDGPVDAERDWHY
GGGGYLSRAHSTTSLQRSGSPTADEGCSWKSNHHRSEEMQPDLLNFKKGWMSKLDDCGEW
KKHWFVLTDAGLKYYRDSNAEEKDDLDGEIDLKSCMKVSEFDVEKNYGFQIQTREAVFTL
SAMTAGIRRNWIEVLKKSIRPSSSPDLTQLPDNNSDKENSHKRFLSSSRRPSSRHVDSHS
EAPGSAHQAERKIDYVELSPVPASSGLLPTSQREAGEGQGREHSQWQEEKSMSSQWEAVL
SRKGTGVGSNQRLHLEDEIEKRWSEFERMPLRDMSSLSSMGSRTSSPLANEALQREVASL
RQQLDQLQQGGGGGWGKSMRVNCGPEAPCSRSLAAMERAHRHALEELQRQHDRQMRELEK
EKERLLMEETRDTARVMEALKKKHKEELEREVEKVKRLSSGLDPRTLQSQQQAETQALQK
ELAGLSEHYSQKCLELNRAEQRNAEREREVGQKERDMEQLRKENLELKARLTDEMSRTRS
SLTDKSSEDNKDKSCELEVLLRMKNNEIEYLHKEISCLRNELQFLTREKQLACERYAEVH
GELSGMKGRTEREIQSLKEHLRLAMAALQEGQKLGNSLDH
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactccagcgatgagcccacatgtcccaagttccaacccaatatctttgacccc
tcccgctgccacgagtgcctgcgccagaaacaccttcatacaagtgtggcggaaagaacc
gagccacagcatcaggagaaacctctgcctcaggatggggataaaactgagaaaagcgct
ggagttggaagggaggtcgggtcgagtgggagagcgctgctgacgcccatctcatctcag
gcagaggaaggagacaccagcagcagctgcaaggaggactctgacagtgtttcagtggtg
agcagctactgtgatgtcagcagaggtcaggcgggtaatgtggagacctctctgtgcatc
ttgagccctgactgcaagctctatatctgtgaggacgacaacagcacagacagctgtcgt
gagcaaagcgaagagttcagttgttctgttagtacagacgacgaatacttgccgattcga
cgtcaacccaccaaactcaggatgacccggctggaccctccacctcaccggcccaaccct
cggcaggcctggatggaggaaaccagaggtggaggcagcttttctagaggctcagatgta
aaagaagatagagagaagcgtgaaagtggctactactcacttggcagggcagctggtgcc
cgttttaatgaaaaaagccaacctactccttttcgccattttgaaagaggtcatccaatc
tttagtcacagaaacattgagccaaaggatactatccccttccgaaatcccaatcttgga
gttgcctccgaaaggccaataccagacgtgttcagtgaggaccttacagcagatatcccc
ccaccagacccttatgaggttgcggttgaggtcgaagcacaagtagggcctcgatccccc
agtcctactccttttaaaatagcggagtcgctggcctcaactggccgaaaaggtttaaga
ggtggatataattcctcaacgcaaggctcagctctgcattctcgctcttcatccccatca
cgggaaaacttgcagttaagacaccgtgagcctagcagcattcttaacaggacaaacttt
gatggtggaggttggtctcaaagacaaatggacagatcaagcctctccatacaaggttct
caaggtcgacgttttgagtcaggaactctgccaaaaaacttcaaatcctttccttctatg
tcccagtccagtacagtttctgattttaggaatgccttaaggaaaacggaagcagattgt
tctttaaagggcacagattatgtgaaaaggagctcatctccttcaaggagagaatatgca
tcgtcattcaagatgtctcccaatactgaagtcaacactagttggacacatcgtatttcc
tccccatccagaacgtatgatcatatgcaggagagtcgtacttcctcttcccctaggaga
aatctgaactcctcaagccattccttaggtagatctgaatccaacatatccctaaatgaa
cgaagtcaccatcaacgtagtggttctccggtatcttctaggccacccaggagtaatttt
aactcgtcgagccattccctccgtaaatctgaatccatcacatctctaaatgagcgaagt
acccatcgacgtagtggttccccagtatcttccacattgccaagcagaaattttaattca
tcgcgccattccctgcgtaaatctgaatccactacttccctcaatgagcgtagtcaccat
caacatagtggttccccagtatcttctaggccaccaaggactacttttaactcatcaagc
cattccctacgtcaatctgaatccatcacatccctaaacgagcgaagtaaccatcaacgt
agtggttctccggtatcttctaagccacccaggagtaattttaactcgtcgagccattcc
ctacatcaatctgaatcaatgatatccctaaacgagcgaagtaaccatcaacgtagtggt
tctccagtatcattcatgcaaccaaaaggaaatttaaggtcaacaagcccctctttccat
cataaatcaaccaaatcaattacatctctaaatgagcgcagtcatcataggcgctgtggc
tcccctgtaagagagggttatgggatagaaggccaggcccagctgcgtaacctagcaact
agaaacggactgatggatcaggaacgtgaagtcactgtttcttcatctagccatgattct
gatagaccaagacaatccatacttaaaaagcctgagtcaagcactgtaagcggcagtcga
tcctggggcagccgctcttcctctccttcaaaaagaggtcaggaaacttttgcccaagga
aggcataacagtggtggatcagtaaatggccatgttcatgaaaagcgaaaatcttcagtt
tcagggaaaaactttgattctacttttaaatctcagcaacagaagacagagactgctagc
tccattagaagccatgacaatgagagttcattggctttgaggggaacccattatgcttct
gactatcactcatctggaaatatgcgaactggaagctcatttaacagcaagtacctacac
actagccgcactccctctccttccagaaaaggtaataatgaccccccaggctactccgtc
cttagaagtgccaccaaaggagatgcaaatggttcttttgagacaaaaaacaccagtggt
aaatcaaaatatgactcacattcctcatcactctcacagcgaggatccacacattcccgc
cacggctcctctttatctcgtgctacttcgccatccagaaaatctgtaaataacaacaaa
gatgcccatgttacattagaatcatccagatcctctagctcaatgagatctaggattggt
acttatggccacgatgatcaacctcttcatgaaaagaggtcttctcattatgcaaggagc
ccctctccatcacagcagattcaaatgcactcgtcatcgcaaagctccatggagtccact
gagtcgggccaggtctctgttggatcgacaggacggaacagggaggagtacgctgcgatg
gccgacctgccaaaagtcaaaataatccatcagagggaagggccaagccacgtgggaagg
ccacagagtcaccagcctgttcgaagacaggaactttttaaaccagccagtcactccttg
agcagacatccctccatagaatgggatggtcctgtagacgcagagagagattggcattat
gggggtggtggatatctatctcgagctcactccactacgtcactgcagagatcaggcagt
cccacagcagatgagggctgttcgtggaaaagtaatcatcacagatcagaagaaatgcag
cctgacctcttgaacttcaaaaagggatggatgtcaaagctggacgactgtggagagtgg
aaaaaacactggtttgttttgactgatgctggactgaaatattacagagactccaatgca
gaagagaaagatgacctggatggagagattgatctgaaatcttgcatgaaggtgtcagag
ttcgatgtggagaagaactatggctttcagatacagacacgggaggctgttttcacgcta
tctgccatgacagctgggatcaggcgaaactggatagaggttttaaagaagagtatccgt
cccagcagctctcctgacctcacacaattacctgacaacaacagcgacaaagaaaactcc
cataaacggttcttgtcgtcttcccgtcgcccatcatcacgccatgtcgactcccactca
gaggctccaggctcggcccatcaagctgaacgaaaaatcgactatgtagaactctctcct
gttcccgcctcttctggccttcttccaaccagtcagagagaagcaggggagggccagggg
cgagagcacagccaatggcaggaggagaagagcatgagcagccagtgggaagccgttctg
tcccggaagggaacgggtgtgggatcgaaccagaggctacacctggaggatgaaatcgag
aaaaggtggtccgagtttgaacgaatgcctttaagggacatgagctccttatcatcgatg
ggatcgaggacctctagcccgttggccaacgaggcgctgcagagggaggtggcgtcactg
aggcaacagctggaccaactgcaacaggggggaggaggggggtgggggaaaagcatgcgt
gtcaactgcggccctgaggcaccctgcagccgcagcctggcagccatggagcgcgctcat
agacatgccctggaggagctgcagaggcagcatgaccgccagatgagggaactggagaag
gagaaggagcgactgctgatggaggagaccagggacacggcaagggtgatggaagctttg
aagaagaaacacaaagaagagctggagagagaggtggagaaggtcaagaggctgagcagt
gggttagaccctcggactctgcaatcccaacaacaggctgaaactcaagccttgcagaaa
gagctggctggcctctctgagcactattctcagaagtgtctggagctcaacagagctgag
cagagaaacgctgagagagaacgggaagtgggtcaaaaagagagagacatggagcagctg
aggaaagagaacctggagttaaaggcccgtttgacggacgaaatgagccgaacacgatcc
agcctcacagataaaagctcagaagacaacaaagacaagtcctgcgaactagaggttctt
ctcagaatgaaaaataacgagatagagtatctgcacaaggagatcagctgccttaggaat
gagctgcaatttctaaccagggaaaagcagctggcctgtgagcggtacgcagaggtgcac
ggagagctgagcgggatgaaaggccgtacggagcgggagattcagagtctaaaggagcac
ttaaggctagcaatggctgctctacaagagggacaaaagctagggaacagcctggaccac
tga
DBGET
integrated database retrieval system
