Cyprinodon variegatus (sheepshead minnow): 107088643
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Entry
107088643 CDS
T06110
Symbol
pex6
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107088643 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107088643 (pex6)
Membrane trafficking [BR:
cvg04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
107088643 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_33
RuvB_N
DUF815
AAA_5
AAA_11
TsaE
RNA_helicase
TIP49
NPHP3_N
AAA_7
AAA_19
Vps4_C
AAA_18
Mg_chelatase
nSTAND3
AAA_28
AAA_24
AAA_17
Parvo_NS1
IstB_IS21
PEX6_4th
AAA_25
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
107088643
NCBI-ProteinID:
XP_015236429
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MCFKVQQNLLELLVLDCSPVRQGKITADTSLVLTECWDAVDPPGRSLPPRPPRLCVSDFA
HYADSLAGSRSLLDSRRCLGSGLPDVLQALECRLDVSVVDTQRWSRVKGPQGELVDSDGC
VFMSKQLLLRLGLFNHEWVRLSRSAGSYRGPEEEVDVRVRPCRERLVSAVVVDLTPSPER
EIHEDVGFISATLWFNLTEGEAVPWKNSALRMKRLKPAPPDLNQNSSSFCRSASLPFANE
LHIQPVLSPQGGHLSCADNLLAEHFSTPRVVSLGDILTVPAKNHPDLLENNADGIHRCPV
LYFKVQKLLQSGAERGGGGAFLADKTHTSLYMGASTNSRVPPCCVEAEPLWSSLSPPGLN
KTVDVLIRLILPHLEHRDSLSSCTVLLHGPAGSGKVTAVRAAGRRLNLHLLKVDCVTVCA
DTPAAVEAKLKSAFQRAEALQPCVLLLRNLQLLLRAGGAAEDDGRVQAALCQLLSSAPAS
VVVVATVCRARHLSSGVMGAFVHQVEMESPAEEQRLSMLVSLSRELPLGRDVDLQRLSKL
TAGYLLGDLSALLTEAGRAACRRLIHAWCKKQNMNLGYFTATITPCGFHPGSQXKNLTWF
ILNKQIPNVRWEDVGGLEQVKKEVLDTVQLPLQRPELLSLGLNRTGVLLYGPPGTGKTLL
AKAVATECSMTFLSVKGPELINMYVGQSEENIREAPSTCRFDKLVYVGINEDRVSKLKVL
KAILRKFQLEPSVNLQDIVDHCPAVVTGADLYALCSDAMTAAIKRKIHLIEDGLDSEDSP
IFLSEEDFSVALNNFKPSVSEKELLRYQNIHQELSGK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttaaggtgcaacagaaccttctggagctcctggttctggactgcagtcctgta
aggcaggggaagatcacagcagacacctctctggttctgacagagtgctgggacgctgtg
gaccctcctggccgttctttgccccccaggcccccccgtctgtgtgtttcagactttgct
cactatgcagacagcctggccgggtctcggtctctccttgacagccggaggtgtctcggt
tctgggctgcctgacgtcttgcaggcgttggagtgcaggttggacgtatccgtggtggac
actcaacgatggtccagggtcaaaggcccgcaaggagagcttgtggactcagacggctgc
gtgttcatgagcaaacagctgcttctgaggctgggtctgttcaaccacgagtgggtgagg
ttgtctcggtctgctgggagctacagaggaccggaggaagaggtcgatgtcagggttcgc
ccctgcagagagcgcctggtctctgcagtcgtggtggatctaacaccaagtccagaacgg
gagatccacgaggacgtgggcttcatctcagccactctgtggttcaacctgacggaagga
gaagcagttccctggaagaactctgcgctgaggatgaagagactgaaaccagctcctcca
gatctcaaccagaactcctccagcttctgccgctcagcttctctgccgttcgccaatgag
cttcacatccagccggtcctctccccgcagggcggccacctcagctgcgctgacaacctg
ctggctgagcacttcagcacgccacgagtggtttcactgggagacatcctgacggttcct
gctaagaaccacccagacctgctggaaaacaacgctgacgggatccacaggtgtccggtg
ctctactttaaagtgcagaagctgcttcagtctggtgcagaacgaggaggaggaggagcg
tttctggctgataaaactcacacctctctctacatgggagcgtccaccaacagccgggtt
cccccctgctgcgtggaggcagaacctctgtggagcagcctgtctcctccaggcctcaac
aagaccgtggacgtcctcatccgcctcatcctgcctcacctggagcacagggactctctg
tccagctgcaccgtcctcctccacggtcctgcaggcagcgggaaggtgacggcggtccga
gcggcgggacgcaggttgaacctccacctgttgaaggtggattgtgtcaccgtgtgcgca
gacactcccgccgccgttgaggcaaagctgaagtcggcgttccagcgagccgaagccctg
cagccctgcgtcctgctgctcagaaacctgcagctcctgctcagagctggaggtgcagct
gaggatgacggcagggtgcaggcggctctgtgtcagctgctcagcagcgcccccgccagt
gtggtcgtcgtggccacggtgtgcagagctcgccatctctcctctggtgtcatgggggcg
ttcgtccaccaggtggagatggagagccctgcagaggagcagcggctctccatgttggtc
agtctgagtcgagaacttccactggggagagacgtggacctgcagaggctttccaaacta
accgcaggctatttgctgggagatctgagcgctctgctgaccgaagctggaagggccgcc
tgcagaaggctgatccacgcctggtgtaaaaagcagaacatgaatctcggttattttaca
gcaaccattacaccctgtggtttccatcctggctcccagtaaaaaaatctaacctggttc
attcttaataagcagatccctaacgtccgctgggaggatgttggcggtttggagcaggtg
aagaaggaggtcctggacaccgtgcagcttcctctgcagcgtcctgagctcctgtctctg
ggcctaaaccggaccggagtcctgctgtatggcccaccggggacagggaagactctgctg
gccaaagctgtggccacagagtgctccatgaccttcctcagcgtcaaaggtccagagctc
atcaacatgtatgtgggtcagagcgaagagaacatcagagaagctccgtctacctgcagg
tttgacaaactggtctatgttgggatcaatgaggaccgagtgtccaagctgaaggttctc
aaagccatcctcagaaagttccagttggagccttctgtgaaccttcaggacatcgtggat
cactgccccgctgtcgtgaccggagctgatctgtacgctctctgctcagacgccatgaca
gctgccatcaagaggaagatccatctgatcgaagatggtctggattcggaggactctccc
attttcctctctgaggaggatttctcagttgctctgaataacttcaagccttctgtgtct
gagaaggagctgctgcgataccagaacattcaccaggagctctctggaaagtaa
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integrated database retrieval system
