Cyprinodon variegatus (sheepshead minnow): 107088696
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Entry
107088696 CDS
T06110
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107088696
03021 Transcription machinery [BR:
cvg03021
]
107088696
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
107088696
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
107088696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
107088696
NCBI-ProteinID:
XP_015236503
Ensembl:
ENSCVAG00000011359
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MTDRSQTPEVQSRPYDFSRSGACSSQVLGQEGNVSFQLPHGVLPDPSLFYSKAAYGGITP
GSAQTFLPFPPDYRGSDLQAGDFGQPKHWYPFPAPEYTGQIPGVTAATQPTNMSPPIAET
REQIRLPDIKTEEDTGEGYSTDMKAQQYPTLAPSTGMTHGVFYPPAWNPSFWPGITHIAP
TGSNNQNPSASSASSPSMSPSPPSNGIQGNSFFSVNSNQVPAEPQAQNPASNARSSGSSS
GGCSDSEEEILTTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICRFEAL
QLSFKNMCKLKPLLQRWLDEAETSDNPQDMYKIERVFVETRKRKRRTSLEGAVRSALEAY
FIKCPKPNTQEITQISDDLGLERDVVRVWFCNRRQKGKRLALPLDEECEGQYYEQSHSPL
NMAPSPIQSQAYPSSGYTGAPPPTLYMPQLHRPDVLKQALHPGLVGHLTG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagatcgcaaactcctgaggtccaaagcaggccttatgactttagtcggtct
ggtgcttgcagcagccaagttttgggtcaagaaggaaacgtttctttccagcttcctcac
ggggttctgcctgacccgagcctcttctacagcaaggccgcatatggagggatcacacct
ggatccgcgcagacgtttctcccgtttccacccgactacaggggatccgacctgcaggct
ggggactttgggcagccaaagcattggtatcccttccctgcgcccgagtacaccgggcag
atacccggcgtgactgcggccacccagcctacaaacatgagcccgccgatagccgagact
cgggagcaaatcagattacccgatattaagacggaggaggacactggagagggttattct
accgacatgaaggctcagcagtatccgactctagcaccttccacaggcatgacccatgga
gtcttctaccccccggcctggaacccctccttctggcctgggatcacccacattgcccca
acagggagcaataatcaaaacccctctgcgtcctcagcatcgtccccttccatgtccccc
tcacccccaagcaacgggattcagggaaactcattttttagcgtaaactcaaaccaggtt
cctgctgagcctcaggcgcagaacccggcctccaacgcacggagcagtgggtcctcaagc
ggtggctgcagcgactcagaggaggaaatcctcaccactgaagaactggagcagtttgca
aaagagttaaagcacaaacgaattactttgggttttactcaagcagatgttggccttgct
ctgggtaacctttatggcaagatgttcagccagacaaccatttgccgatttgaggctctg
cagctgagcttcaagaatatgtgcaaactgaaaccccttctgcagagatggctggatgag
gcagaaacgtcggacaatcctcaggatatgtacaagattgagcgagtgttcgttgaaacc
aggaagagaaaacggaggaccagtctggagggagctgtgcgctctgcgttagaggcctac
tttatcaaatgtccaaagccaaacacccaggaaataacccagatctcggatgatctgggc
ctagaaagagatgtggtgagagtctggttttgcaatcgaaggcagaagggaaagcgtctc
gccttaccattggatgaagagtgtgaaggccagtactacgagcagagccattcaccattg
aacatggccccttcccccatccaaagccaagcctacccatcctccggctacaccggagca
ccccctccaaccctttacatgccccagctacaccgacccgatgttctgaaacaggccctg
catcctggactggttggtcacctgactggataa
DBGET
integrated database retrieval system
