Cyprinodon variegatus (sheepshead minnow): 107088700
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Entry
107088700 CDS
T06110
Symbol
rabgap1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvg04131
]
107088700 (rabgap1)
Membrane trafficking [BR:
cvg04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
107088700 (rabgap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
107088700
NCBI-ProteinID:
XP_015236511
Ensembl:
ENSCVAG00000012167
UniProt:
A0A3Q2E2P6
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MDDKGSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVAEAGLGSGEGMSDLGATDHGVPSNTMSPVLAGTDPL
SSTSPTLEMVLPVQTAQESELNERSYRADESSSEGSPCSPIPDEDSVVFSQLTYLGCASV
NAPRSEVEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPHNNTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHHNAEIFRIHVFRCQIREAVSRILYSFATAFRRSAKKVLLSS
QQNAPLTPDSDLFTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGLDKKIVIYVQQTS
NKELAIERCFGLLLSPGRNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQAVNE
ETPKDKFMYMTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRSYTETFYLKLR
QMERKERKSPSSDTLYEVVSLESETEREKRKTTASPSILSSGPGTMAPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGDLLSKWHMNLSVRPKQLPALVRSGIPEALRGEVWQLL
AGCHNNDHLVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDQEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNV
ALALLKTSKDDLLQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSMKISQKKLKKFER
EYHTIREQQEQQEAPIERYERENRRLQEANMRLEQENDDLAHELVSSKIALRKDLDNAEE
KADALNKELLLTKQKLIESEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQ
ICSQLSERLEKQQTASRGELEKIRSKVEGCEKCSSLFNKEGRVRTAVTTAPADGTEETDE
EKEELKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTLSSIK
TVTGTQGKETT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaagggctctgtggggaagattagcgtgtcttcagactcagtgtccactctc
aacagtgaggactttgtcctcgtgtcccggctgggggacgagaccccttcgtccaccaat
aatggtagcgatgacgaaaagacgggactgaaggtgatttcagaggaaggggtcagcttt
aagattgtggggaatgggagtgagcagcagcttcaaagggagttggaggacgtcctcatg
gatccatctgtggcagaggccggtcttggttcaggagaaggaatgagcgaccttggcgct
actgaccatggtgttccttcgaacacgatgtcacctgtgctggcaggcaccgacccactg
agttccacgtcacccacactggagatggtgctccccgttcagaccgctcaagagagtgag
ctgaatgagaggtcctacagagcagatgagtcctcatcagaaggaagtccttgcagtcca
attccagatgaggacagtgtggtgttcagccagctaacatatctggggtgtgcctctgtc
aatgcccccaggagtgaagtagaggcccttcgtatgatgagtatcctccgagggcagtgt
cagctccccctggatgtcacactttcagtgccaggagtctctgaaggcaccgtcaggttg
ttggacccgcacaacaacacagaaatagccaattaccccatttataagattctgttctgt
gtgagaggccacgatggcacaccagagagcgactgctttgccttcacagagagccaccac
aacgcagaaatcttcaggatccacgtgttccgctgtcaaattcgagaggcagtgagccgg
atactgtacagcttcgccacagcctttcggaggtcagccaagaaggtgctgctgtcttct
cagcagaatgccccgctcacaccagacagcgacttgtttaccttcactgtcagtctggag
atcagggaggatgatgggaagggtactttcagtgctgttgcaaaagacaaggacaaacaa
agcttcaagcttcgggctggactggacaagaaaatagttatttacgttcagcagacctcc
aacaaggagctggcaatcgagagatgttttggactcctgctcagcccggggagaaatgtc
aagaacagcgacatgcacctgctggacctggagtcaatgggaaaaagctcagatgggaag
tcttacatcatcacaggaagctggaaccccaacacgcctcagtttcaggctgtgaacgag
gaaacgcccaaagataagttcatgtacatgacgactgcagtggatctggtgataactgag
gtggaggaaccggtccgttttctgctggagacgagggtcagagtgtgttctccaaacgac
aggctcttctggccctttagcaagcgtagctacactgagaccttctaccttaaactacga
cagatggagcgaaaagaacgaaagagtccttcctctgacacactttatgaggtggtgagt
ttggaaagtgagacggagagagaaaaaagaaaaaccacagctagtcctagcatcctctct
tctgggcccggcaccatggctccttcgccacccgaggatgatgaagaggaagataacgac
gagccattactcagtggatctggggacgtttcaaaggagtgtgcagagaagatcctggag
acgtggggagacttgttgtccaaatggcacatgaacctgtcggtgcgaccgaaacagctg
ccagctttggtgcggagcggcatccctgaggcactccgtggggaggtgtggcagctcctg
gcaggttgccataacaacgaccacctggtagaagaataccgaactctcatcacaaaggaa
tctcctcaggacagtgcaatcaccagggacataaacaggacgttccccgctcatgactat
ttcaaagacactggtggagatgggcaagattcgctctacaagatctgcaaggcttactct
gtttatgatcaggagattggctactgccagggacagtccttcctggctgcagtgctgctg
ctacacatgccagaggagcaagctttcagtgttctggtgaagatcatgtttgattatggg
ctcagggacctgttcaaacagaactttgaagatctgcactgcaagttcttccaacttgaa
agactcatgcaggagtacataccagatctgtacaaccatttcctgaatgtgggtctggag
gctcatatgtatgcttcccagtggttcctaaccctcttcacagccaagtttcctctttac
atggtcttccatattatcgacctgctactgtgtgagggtataagtgtgatcttcaatgta
gccttggcccttttgaagacatcaaaagatgatctactgcagacggactttgagggtgct
ctcaaattctttcgcgtccccgtcccaaagcggtaccgctcagaagaaaatgccaagaag
ctaatggagctggcctgtagcatgaagataagtcagaaaaagctgaagaaatttgagagg
gaataccacaccatacgggagcagcaggagcaacaagaagcccccatcgagagatatgag
cgggagaatcgtcggttacaagaggccaacatgcgtttggagcaggagaacgatgacttg
gcacacgaactagttagcagcaagatagctcttcggaaagatctggacaatgctgaagaa
aaggcagatgcactgaataaagagctgctactgaccaaacagaagctgattgaatctgaa
gatgagaagagacgtctggaagaagagtctgcacagttgaaagaaatgtgtcgaagggag
cttgataagtcggagtcggagataaagaagaacggttctattattggagaatataaacag
atctgctctcagctgagtgaacgactggagaagcaacagacggcttctcgaggagaactg
gagaaaatcagatccaaagttgaaggctgtgagaagtgcagcagtcttttcaacaaagag
ggccgtgtgcgaactgctgtgaccacggcgcctgcagacgggacggaggagactgatgag
gagaaggaggagctgaagaaccagctgagggagatggagctggagctggcccagaccaaa
ctgcagctggtagaggccgagtgcaagatccaggacctggagcatcatttgggtctggct
ctcaacgaggtgcaggccgccaaaaagacctggttcaaccgaacgctcagctccatcaaa
acggtcaccggcacccagggcaaagagaccacttaa
DBGET
integrated database retrieval system
