Cyprinodon variegatus (sheepshead minnow): 107088702
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Entry
107088702 CDS
T06110
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107088702 (strbp)
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107088702 (strbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DZF_C
dsrm
DZF_N
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107088702
NCBI-ProteinID:
XP_015236517
Ensembl:
ENSCVAG00000011985
UniProt:
A0A3Q2FT70
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MRSFRSFSNDDRHVMAKHSTIYPSSQELEAVQTLVSTVECALKQVADWLDQSSSDAPNNS
FDSQPAESTEEDPAEEPREEAEESTEGSSRESGGCGMLCGVMRVGLVAKGLLIKGDMDLE
LVLMCRDKPTQTLLDTVCHNLPTQIQKLTEEKYEVTSSLPEAAILVQTTTDPKLKLKITL
TSPAMREDEDLEEEEEEEEVEEEEEEALENGEHEEEVAEQAEAEIVEEEPGQENGEVLGA
AAHTVEAEEEGEVLDRHRCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHPMWE
PLKGWPLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKEPTDTLS
NMTDQEAEAITYGAQHALRLMAFGQIYKVLEMDPLPSNKPSQKYPWSDKEGVGLKRPYED
GTMDDKDLIKKMKRNLRKVLDSKAIDSNQPMNALMRLNQIRPGLQYRLLSQSGPVHAPVF
TMSVDVDGTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDSDLDPMSSDEKSDSEGKSET
SSHSGNNQTHSSDGSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAANKKKKILPPTKGQLAAAA
AAASAVAAQVARGRGRAALARGAFVSAAAPGYVTPGFGTPYGYSPAAAAAPAYGGLFIDN
PFYQPRTIAPFIIHLGPQDLFSDF
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccttccgttccttcagcaacgatgaccgccacgtcatggcgaaacactccacc
atctatccctcctcgcaagagctggaagctgttcagacgctggtgtccaccgtcgagtgc
gcgctcaaacaagtcgccgattggctggatcagagcagcagcgatgcccccaacaacagc
ttcgacagccaaccagcagaaagcactgaggaggatccagcagaggagcccagggaagaa
gcagaggaatccacagagggaagcagcagagagtctggcggttgtggcatgctctgcgga
gtgatgagggtcggtctggtggctaaaggactcctgatcaaaggcgacatggacctggag
ctggtgctgatgtgcagagacaaacccacacagacactgctggacactgtctgtcacaat
ttacccacacagatccagaagctgacagaggagaaatatgaggtcacaagctctttgccc
gaggcagctatcttggtacaaactacgacagatccaaagcttaagctgaagatcaccctt
acctcaccagccatgagggaagatgaagatctagaggaggaggaggaggaggaggaggtg
gaagaggaggaagaagaggcgctggagaacggggagcatgaagaagaggtagcggaacaa
gcagaggcagaaattgtagaagaggagccggggcaggaaaatggtgaagtgttgggtgct
gctgcgcacacagtggaggctgaggaggagggggaggtgctggatagacacagatgtctg
ttggccctggcagcgctgcgacacgccaaatggtttcaggctcgagtgaacggacttaag
tcctgtgttatcgttctcaggatactaagagacatgtgcaatagacaccccatgtgggaa
cctctcaaaggatggccattagagctaatatgcgaaaaggccattgcgacttgcaacaga
cctcttggggcaggagaagccttgcgtcgagtcatggagtgtctggcttcaggcatactg
ctcccagggggtccaggtttacatgatccatgtgagaaagagcccacggacactctttcc
aacatgacggaccaggaggctgaggccatcacctacggtgcacagcatgctctcagactc
atggcatttggacagatctataaagtgttagagatggatcctcttccctcaaataaacca
tcacagaaatatccttggtctgataaagaaggtgtagggctaaagaggccgtatgaagac
ggaacgatggacgacaaagacctcattaagaagatgaagaggaacctcagaaaagtcctg
gacagtaaagccatagactccaaccagccaatgaacgccctgatgcgcttgaaccagatc
cgaccagggctgcagtatcgcctgctgtcccagtcggggccggttcacgctccagtcttc
accatgtctgtggatgtggacggaaccgtctatgaagcatccggatcctccaagaaaaca
gccaagctccacgttgctgtcaaggttctccaggcaatgggctacccaacaggattcgac
tcagatctggaccccatgagctcggatgagaaatctgacagcgaggggaagagtgagacc
tcttcacactcaggcaataaccaaacccactcctcagatggttctaacacactggaggtg
cgaactcagggccccattctaacggcaagtgggaagaatcctgtaatggagctaaacgag
aagcgacgaggcctcaaatacgagctcatctccgagagcggaggcagccatgacaaacgc
ttcgttatggaggtggaggtcgacgggcagaagtttcgtggggcaggccctaacaaaaaa
gtagcaaaggccagcgctgctctcgcagccctggaaaaactcttctctggtcccaacgcc
gctgcaaacaagaagaaaaagatccttcccccgactaaaggacaactggcagcagcagca
gcagcagcctcggcagtagcagcacaggtagcaagaggaagaggaagagcggcactggca
agaggagccttcgtcagtgctgctgcacctggatacgtcactccaggcttcggcacgccg
tatggatacagccccgctgcagcagctgctcctgcatacggtggtctgttcattgacaat
cctttctaccagccgcgtaccatcgctccttttattattcacctcggtccgcaggatctt
ttctctgacttctga
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