Cyprinodon variegatus (sheepshead minnow): 107088704
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Entry
107088704 CDS
T06110
Name
(RefSeq) programmed cell death 1 ligand 1-like isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107088704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cvg04090
]
107088704
CD molecules [BR:
cvg04090
]
Proteins
107088704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
C2-set_3
NACHT
ig
C1-set
C2-set_2
AAA_16
CPT
Ig_CD22
nSTAND3
AAA_25
AAA_14
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107088704
NCBI-ProteinID:
XP_015236523
Ensembl:
ENSCVAG00000012397
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MIQSHHSAELTTRVKEIPMDLTIIALLHVFLQPSLAALFTVEAEQTSYMSEYGGNVVLGC
KFSSQPENPQNGLKVIWHWMTSNPQEVMRLEDSVESFASPKYHGRVKLLSDELKNGWAKL
QISDLRITDSGSYQCFIQTTEGHDYKTISLSVGAPYKSITKRIETTAEGDKVVLTCQSEG
YPESVVVWQNGNLQEHHPNTTTKPAPDNLFKVTSHIEVSSTEKNNYTCNFTKDGYSATFH
IPDEILSPHGKNDVLIPVLCIGFLLAALGLGMVTYKHKKGSRSPSTRNCLVDDGENSTSA
TACLKRDKERELEEIVITEEENLRSHLKARYSEFSLTTKVRCDCDNFAAEELPHRLQNNE
GLHVRLQDLLPKAGKVLLLEGPSSSGKTTVANILLSSWTDGAPKFFDGSFLDLLLYVNCS
ALRGDLFEEARTQLSLIDKVSAEELRTALAKSDKTLLLLDGYKEGNHFSDETLRRFLSDR
GSCRVLVTSCPGDCPVLKQTLTTEGTLKLHMQSGKY
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaagccaccattcagctgagctgacgacgcgagtcaaagagattccaatggac
ttgaccattattgcacttctgcatgttttcctgcagccatctctagcagcgttgtttaca
gtggaggcagagcagacctcatacatgtcggagtatggaggaaatgttgtgctgggctgc
aagttttcctcccaaccagaaaatcctcagaatggcctgaaggttatctggcactggatg
accagcaacccgcaggaagtgatgcgactggaagacagcgtggagtcctttgcatctcca
aagtaccacggtcgagtgaagcttctctctgatgagctgaaaaacggctgggcaaagtta
cagatatcagatctcaggatcactgactctgggagctatcagtgttttattcaaacaaca
gaaggacatgattataaaactataagtttgtcagttggagctccatataaatcgatcaca
aagcggattgagacgacagcggagggggataaggtggtgttgacctgccagtctgagggt
tacccggagtctgttgttgtgtggcagaatggaaatttgcaggaacaccatccaaacacc
acaactaaaccagcgccagacaatctgttcaaagtcaccagtcacattgaagtcagctcc
acagagaaaaacaattacacatgtaacttcaccaaagatggctactctgctacgtttcac
attccagatgagatactgtcccctcatggaaaaaacgatgtccttattcctgtgttgtgt
attggatttctgttagctgccctcggtcttggaatggtgacttacaaacataaaaaaggt
tccagaagtcccagcactaggaactgtctggttgatgatggggagaactccacatctgcc
actgcctgcctaaaaagagataaagaaagagagcttgaagaaatagttattactgaagag
gaaaacctgaggtcacatctgaaagctcgttattctgaattctccctcactacaaaggtg
agatgcgactgtgataatttcgctgcagaggagctgcctcacaggctgcaaaacaatgag
ggcctacatgtgagactccaggatctactcccgaaagctggtaaagtcctgttactcgaa
gggccctcaagcagtgggaaaacaaccgtagccaatatcctgctctcatcttggaccgat
ggtgctcccaaattctttgacggcagttttttggatcttcttctgtatgtgaactgcagc
gccttgaggggggacttgtttgaggaagcaagaactcagctgtctctcattgacaaggta
tcagcagaggagctgaggactgctctggccaagtccgacaagactctgctactattggat
ggttataaagaggggaaccacttttctgatgagactttaaggaggtttctaagtgataga
ggatcttgtagagtattggtcacttcctgtccaggtgactgtcctgtgctcaaacagact
ctgacaacagaagggacgctgaagcttcatatgcaatctggaaagtactga
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integrated database retrieval system
