Cyprinodon variegatus (sheepshead minnow): 107088708
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Entry
107088708 CDS
T06110
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4 isoform X1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03320
PPAR signaling pathway
cvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
107088708 (slc27a4)
09158 Development and regeneration
04382 Cornified envelope formation
107088708 (slc27a4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cvg01004
]
107088708 (slc27a4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvg02000
]
107088708 (slc27a4)
Lipid biosynthesis proteins [BR:
cvg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107088708 (slc27a4)
Transporters [BR:
cvg02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
107088708 (slc27a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107088708
NCBI-ProteinID:
XP_015236534
Ensembl:
ENSCVAG00000011645
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAVTCLRMMRLACCTALLFVLRLLVGLPWYQVLPAILIFYLGSGGWNFLDIVAKTIGRDL
HAAYVLLRVKLNVKRHVREKNTIPKIFAETVQRHGDKTALIFEGTGERWTFRQLDEYSNR
VANLLLDRGFKEGDVVALFMENRSQYVGLWLGMAKIGVEAALINFNLRLEALVHCVTISN
AKAVVFGSELAEAVSEVHSSMRKAVLMFCSGDYDPKQVPQGTECLETLLTGASSRLPKRP
QRCFTDRLFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMTSDDVLYDCLPLYHSAG
NIVGVGQCLIHGMTVVIRKKFSASRFWDDCVKYNCTIVQYIGEICRYLLNQPVRDTERQH
RVRMALGNGLRQSIWEEFMKRFNIPQIAEFYGATECNCSLGNFGNKVGACGFNSQILPFI
YPIRLVRVDEETMELIRGPDGVCIPCKPGEPGQLVGKIIQNDPLRRFDGYVNQSATSKKI
ANSVFKKGDSAYLSGDVLIMDKYGHMYFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKD
VVVYGVEIPGAEGKAGMAAIADPSQSTDLETFFKDMEKVLPPYARPVFLRFLPEVNKTGT
FKFQKTELRRDGFNPTAVSDRLFFLDSSRGRYVQLDEELYRSIVSGKHKL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcacatgtttgaggatgatgcgtctggcatgttgcacagcgttgctgtttgtg
ttgaggctgttggtgggcctgccatggtaccaggttcttccagccatcctgatattctat
cttggaagtggaggatggaactttctggatattgttgccaaaacaattggcagagatcta
cacgctgcctatgtgttgctgcgcgtgaagcttaacgttaagcgccacgtcagagagaag
aacactattcctaagatctttgctgaaacggtgcagcgccatggggacaaaactgctctc
atctttgaggggaccggagaaaggtggactttccgacagctggacgaatattccaaccga
gttgccaatctgctgctggatcgaggctttaaggagggcgatgtggtggcccttttcatg
gagaacagatcccagtatgtggggctgtggttgggcatggctaaaatcggagtcgaagct
gctctcatcaacttcaacctgagactagaagcactggtgcactgtgttaccatctccaat
gccaaggctgtggtgtttggttcagagctggctgaagcggtgtctgaggtccacagttca
atgagaaaggcagttctcatgttttgctctggagactatgaccccaagcaagtaccgcag
ggaactgagtgcttggagaccctgctgaccggcgcttcgtctcgcctccctaagcggcca
caacgctgcttcacagatcgcctgttttatatctacacatcaggaaccacagggatgcct
aaagccgccattgttgtgcacagcagatactaccgcatggctgcgttggtttattacggc
tttaggatgacatcagacgatgtcctgtacgactgtctcccgctctatcactctgcagga
aacattgtgggagttggacagtgcctgatacatggaatgacggtggtcatcagaaagaag
ttctctgcgtcccgcttctgggatgactgcgtcaaatacaactgcaccattgtccaatac
attggagagatctgccgatacctactaaaccagccggttcgggacactgagcgccagcat
cgggtgcgcatggcgttgggtaacggcctgcgccagtccatatgggaggaattcatgaag
cgcttcaatatcccacagattgcagagttttacggagccacagaatgcaactgcagcctg
ggcaactttggaaacaaggttggagcgtgtggctttaacagccagatcctgcctttcata
tatcccatcagactggtgagggttgatgaagagaccatggagctcatcagaggccctgat
ggagtctgcattccttgtaaaccaggcgagcctggccagctcgttggcaagatcattcag
aacgacccccttcgcaggtttgatggctacgtcaaccaatcggcaactagcaagaagatt
gccaatagtgtctttaagaagggcgacagcgcctatctttctggtgacgtgctgatcatg
gataagtacggccacatgtacttcaaggatcgcactggagacactttccgatggaaagga
gagaacgtctcgacgactgaggtggaaggaactttaagcaggctgcttgatatgaaagac
gtggtcgtttatggagtagaaatcccaggtgcagaggggaaggctgggatggcagccatc
gctgatccgtcccaatccaccgacctggagacatttttcaaagacatggagaaagttctc
cctccgtatgctagacctgtgttccttcgcttccttccagaagtcaacaagacaggtaca
tttaaattccagaaaacagagctgcgtcgggacggttttaatcccactgctgtgtcagac
agactgttcttcctggattccagtagagggcgctatgtgcagctggatgaagagctctac
cgctccatagtgtctgggaagcacaaattgtga
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integrated database retrieval system
