Cyprinodon variegatus (sheepshead minnow): 107088745
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Entry
107088745 CDS
T06110
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107088745 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
107088745 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
cvg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
107088745 (pdlim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
LIM
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107088745
NCBI-ProteinID:
XP_015236595
Ensembl:
ENSCVAG00000005274
UniProt:
A0A3Q2DS03
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MPPVRVVMQGPGPWGFRLVGGKDFEQPLAISRVNPGSKAAQANLCIGDIILSINGEPTES
MTHLEAQNKIKGCVEEMALSIDRSESKLWSPLSSEEGKTHPYKMNLASEPREVKHIGSSH
NRSALPFSGFGPKVVTNQYNSPSGLYSSENIKDFNSAVDEVKTVATVNEPNNKASSEQPA
AGKRPAVPADSEVYKMLQENQESDEPPRQSASFKVLQEILETGDSDKPSGFRSVKAPTTK
IGSSVGNAEKLPVCDKCGSGIVGMLVKLRDKFRHPECYTCTDCDVNLKQKGHFFVEDQIY
CETHARERVTPPEGYDVVTVFPK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgtccgggtagtgatgcagggtcccggcccgtgggggttccggctggttggg
ggtaaagacttcgaacagccgctggccatttcccgggtcaaccctggaagcaaagcagcc
caggccaacttgtgcatcggagacatcattttatctatcaatggtgagccaacagagagc
atgactcacttggaggcgcagaacaagatcaagggctgcgtagaggaaatggcgctctcc
attgacaggtctgaaagtaagctgtggtcaccactttcatccgaggaaggaaagacgcac
ccttacaagatgaaccttgcgtcagaaccacgggaggtgaaacacatcggttcatcccac
aacaggagcgccctgcccttctctggatttggccccaaagtcgtgaccaaccagtacaac
agtccgtccggtctgtactcttcggaaaacatcaaggacttcaactctgctgtggacgaa
gtgaagacggtggccacagttaatgagcccaacaacaaagcttcgtcagagcagccagcg
gcaggcaagcgaccggccgtaccagcagattctgaggtctacaagatgctccaggagaac
caagagtccgatgagcccccccgacaatcggcttccttcaaggtccttcaggagattcta
gagacgggtgactcagataaaccatcaggcttcaggagtgtgaaagctccgactacaaag
atcggatcttctgtggggaacgcagagaagctgccagtctgtgacaaatgtggttctggg
attgtgggcatgttggtgaagctgagggacaagttccgccaccctgagtgctacacctgc
acagactgcgacgtcaacctaaaacagaagggacatttcttcgtggaggaccagatttac
tgcgagacgcacgcacgagagcgggtcactccgcccgagggctacgacgtagtcacagtc
ttccccaagtag
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integrated database retrieval system
