Cyprinodon variegatus (sheepshead minnow): 107088776
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Entry
107088776 CDS
T06110
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107088776 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvg03041
]
107088776 (prpf3)
Spliceosome [BR:
cvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107088776 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
DUF4011
TPX2
Motif
Other DBs
NCBI-GeneID:
107088776
NCBI-ProteinID:
XP_015236638
Ensembl:
ENSCVAG00000009318
UniProt:
A0A3Q2DYC9
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKKKTIDQLRPFLDDSAG
GFVERLFEALEESRSSRGSKGGGEKNRKRELKDVFGEEAEKGALKAAKDTGDGTSVKRKR
VPRFQEVEEPEVVPGTPSESPAMLTKMQIKQMMEAATKQIEERKKQLSFPSPAPSATADV
SRLPGNPASGGASSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILGTLGNAGP
PNFVTLANLHAMGIAPPKVEAKEVNKPTPLILDDKGRTVDATGKEIELTHRMPTLKANIR
AVKREQFRQQLKEKPGDDIESTSYFDQRVPITPAQRARRGFKFHEPGRFEKIAQRVRTKA
QLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGEGEVPHIEWWDSFILPSNTAINPDSK
FEEFDLFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKEVQEKVR
LGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQR
KEKKVKKLKEDLTNGVHVSVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRDVNLVVVE
GGPKAQKKFKRLMMHRIKWEEHNSKRDDPDGDDDTRRNNKCWLIWEGTAKERSFGEMKFK
QCPTENMAREHFKKHGTEHYWDLALSQSVLEGTDD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgccaaagcgggaggtggaggaactgagaccctgggtggagcgcactgtgaag
aaggtcctgggtttctctgagcccacagtggtcaccgcagctttacactgcgtggggaag
gggctggataaaaagaaaaccatagaccagctgcgtccgttcctcgatgactctgcagga
gggtttgtagagcgtctgttcgaagcccttgaggaaagccgtagcagccggggcagcaaa
ggtggaggtgaaaagaaccggaagagagaacttaaggatgtctttggagaggaggcagag
aagggggcgctgaaggcagctaaagatacaggagatggaacatcagtcaaaagaaaacga
gtcccacgcttccaggaggtggaggagcctgaggttgttcctggaacgccatctgaaagc
cctgctatgctcaccaaaatgcagatcaaacagatgatggaagcagccactaaacagatt
gaagaaaggaagaaacagctgagctttccatcaccagccccatctgcaacagcagatgtg
tcacggcttcctggtaatcctgctagtggaggagcctcatcaatcgccccctctcaggct
gccagctttatgaatgatgcgatagaaaaagcccgcaaagcagctgagctacaggcccgg
atccagtctcaattggctatgaaacctggtatcctaggcactttgggaaacgcaggcccg
ccaaactttgtcacccttgccaacctgcacgcgatgggaattgcaccaccgaaagttgaa
gcaaaggaggtgaacaaaccaacacctctgattctggatgacaaaggtagaactgttgat
gctacaggaaaagagattgaactcacacaccgtatgcccaccctcaaggctaacatacgg
gctgtaaagagggagcagtttcgccagcagctgaaggagaagcctggagatgacatagag
tctacatcctactttgaccagcgtgtaccaataacacccgctcagcgagctcgcaggggc
ttcaaattccacgaaccgggccgctttgagaagattgctcagagagttcgaaccaaggct
cagctggagaggctgcagaatgaaattgctcaggctgcaaagaaaacaggaattcaagcg
tccaccaagctggcactgattgctccgaaaaaagagattggagaaggggaggttcctcat
attgagtggtgggactcgttcatattaccatccaacacggccataaatccggactcaaaa
tttgaagagtttgacctttttggtgtaacaaatctagtagaacatcccgctcaaattagt
ccaccagttgacacagacaaaccagtaacattaggagtgtaccttacaaagaaggaacag
aagaaacttaggagacaaacacggagagaaggacaaaaggaagttcaggaaaaggttcgc
cttggactgatgcctccaccagaaccaaaagtacgtatctctaatctgatgcgagtcttg
gggacggaggctgttcaggatcccactaaagtagaagcacacgtgagggcgcagatggcc
aagagacaaaaagctcatgaagaggccaatgcagctcgtaagctgacagcagagcagagg
aaagaaaagaaggttaagaagttaaaagaagaccttactaatggtgttcatgtttcagtg
tacaggatccgtaacctgcaaaatccagcaaagaaatttaaagtggaggcaaacgccaac
cagctgtacctgacgggcacagtggttctgcacagagacgtcaatctagttgtagtggag
ggaggccctaaagcccagaaaaagttcaagaggctgatgatgcacagaattaaatgggag
gaacacaacagtaaaagagatgatccagatggcgatgatgataccaggagaaacaacaag
tgttggcttatttgggaggggacagctaaggagcggagctttggagagatgaagttcaag
cagtgccccactgagaacatggctcgagagcatttcaagaagcacggcacagaacactac
tgggacttagcgctgagccagagtgtgttggaaggcacagatgactga
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