Cyprinodon variegatus (sheepshead minnow): 107088813
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Entry
107088813 CDS
T06110
Symbol
cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107088813 (cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107088813 (cnot3)
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107088813 (cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107088813 (cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107088813
NCBI-ProteinID:
XP_015236707
Ensembl:
ENSCVAG00000008168
UniProt:
A0A3Q2CMJ9
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIDELKRLIERHRYHI
RMLETILRMLDNDSVPVDAIQKIKDDVEYYIDSCQDPDFEENEFLYDDLDLEDIPPALVA
TSPSGNVEDDMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSHVSQSPVK
NGTPSLQSSFSSSVTSGSSSSSSLSMASVVGGVPAVPTSSSLIGSFSSAVQQHQHQSAQQ
QHQSQPSNQSQQQQQPPQTKPSVPSNNAPSPPSNQALPASTAPSLSTPSTPSSTAPNSQS
NSGSTPSSSLGLGSDLRKSGMSGTSNANQMPSLGLAGHTTPLNTMAGLITSSTSALYAHA
AASGGLGLSNTTQSSVLPESSNSISNSSSSGITTNGAGSGLSLLGSSSAHISLGNSILGL
VPGQSVAPAASQGPPSSANSTPGAVGLMVGNSGNAGVAGVNAAPARPPSGLKQNGSPSYS
AVVAESSTESALSTPSQSQSSQASSLSSSTSQPMDNGPSLISSITLPPSSPSPSFSDSTP
GGGSLLNGPHSFPQASEGLKAPEPLSSLKAMAERAALGSGIEGEISNLHVSDRGLNDIFS
VSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLSKDHLYQQAMQESAWTHMPHPSDSE
RIRQYLMRNPCPTLPYHHQVPPHHSDTIEFYQRLSTETLFFIFYYLEGTKAQYLSAKALK
KQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDL
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaattgacagatgtttgaaaaaagtagcggaa
ggtgttgaacagtttgaggacatctggcaaaaactccacaatgcagctaatgcgaatcag
aaggaaaaatacgaagctgatctcaagaaagagattaaaaaacttcagcgattgagagat
caaataaaaacatgggtggcctccaacgagatcaaagacaaacggcagctagtagagaac
cgaaaactaatagaaacgcaaatggaacggttcaaagtggtggaacgtgaaacgaaaaca
aaagcctactctaaagaaggcttaggacttgctcagaaggtggatccagctcagagggaa
aaggaagaaacgggacagtggctaacgaatacaatagatacactaaatatgcaggtggat
cagtttgagagcgaggtggaatctctttcagtccagacgcggaagaagaagggcgataaa
gataagcaagatcgtatcgatgaactcaagcggttgattgagagacatagataccacatt
cgcatgttggagacaattctacggatgctggacaatgactctgtaccggtggacgctatc
cagaagatcaaggatgacgttgaatactacattgattcctgtcaagacccggactttgag
gagaatgagttcctgtatgatgacctagacctggaagacatccctccggcacttgttgcc
acttctccatcaggcaatgtggaagatgacatgtaccttcactctagcagcactcccacc
tctactacatcttcttcgcccatccctccgtctccggctacttgcactgctgagaactca
gaggacgataagaaaaggggacggtcgacagacagtcacgttagtcagtcgcctgtgaag
aacggtaccccatccttgcaatcttctttctcttcttccgtcacctccgggtcctcttct
tcctcctccctgtctatggcgagtgttgttggaggcgttcccgcggttcccaccagcagc
agtctcataggaagtttcagcagtgcggtacagcagcatcagcatcaatctgcacagcag
cagcaccagtctcagccatcaaatcagtcgcagcagcaacagcagccacctcaaacgaaa
ccttcggtcccctcaaacaatgcccccagtccacctagcaaccaagctctcccagcatcc
accgccccctccctgtccacacccagcacacccagttcaacagctcccaactctcagtcc
aactccgggtctaccccatcatccagtcttgggctcgggtcggatttaaggaaaagcggc
atgagcgggaccagcaatgctaaccagatgccaagcttaggcttggcaggccacaccact
ccgttaaacacaatggcaggcctaattacaagttccacgtctgccctttacgcgcacgca
gcagcatctggtggacttggtctgagcaacaccactcaatccagcgttttgcctgagagc
agcaattccatctccaattcaagctccagtggaatcacaaccaacggagccgggtctggg
ctcagcttgctaggctctagctcagcccacatctctctgggtaacagcatattgggtctg
gtccctgggcaaagcgtggcccccgctgcatcacaggggcccccgagttctgccaactcc
acccctggagcagttggcctgatggtcggaaacagcgggaacgccggtgtggctggagtg
aacgctgctcctgccagacctccgagtggattaaagcagaatggaagcccaagttacagt
gctgtagtggcagagagttccactgaatcagctctaagcacaccaagccagtcacaaagc
agccaagcctcctcactcagctcctcgacaagccagccgatggacaatggccccagctta
attagctccatcacattgcccccaagctctccctccccctccttctcagacagcacaccg
ggtggagggagtctcctcaacgggccccactcatttcctcaggcctctgagggccttaag
gctccggagcccctcagctctttgaaggcgatggctgagagagcggcgctgggatcagga
atagagggagagatctccaacctgcacgtatccgacagagggctgaacgatattttttct
gtttcatcggcagcgcccggcacacctgcagctcctcaaccatctgtttcggaggtcagc
atccccccttcgcttggggtttgtccactgggcccaactcctctctccaaagaccatctc
taccagcaggcgatgcaggagtctgcatggacgcacatgcctcacccctctgactctgag
aggatcaggcaatacctgatgaggaacccatgtcctaccttgccataccaccatcaagta
ccaccccaccactctgacaccatagagttctaccagaggctgtccacagagacgctcttc
ttcatcttctactacctggagggcaccaaggctcagtatttatctgccaaggctctaaag
aaacaatcatggaggtttcacaccaagtacatgatgtggtttcagaggcacgaagagccc
aagactatcactgatgagtttgagcagggcacttacatttacttcgactatgagaaatgg
ggccagaggaaaaaagaggggttcaccttcgagtacaggtatctggaggacagagacttg
cagtga
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integrated database retrieval system
