Cyprinodon variegatus (sheepshead minnow): 107088825
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Entry
107088825 CDS
T06110
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04510
Focal adhesion
cvg04512
ECM-receptor interaction
cvg04810
Regulation of actin cytoskeleton
cvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107088825 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107088825 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107088825 (itga10)
04810 Regulation of actin cytoskeleton
107088825 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107088825 (itga10)
Cell adhesion molecules [BR:
cvg04515
]
Integrins
Integrin alpha subunits
107088825 (itga10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
FG-GAP_2
vWA_SIBA-E
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
107088825
NCBI-ProteinID:
XP_015236734
Ensembl:
ENSCVAG00000009395
UniProt:
A0A3Q2FPY7
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MELRKYLLCLEFLLLLKGFCQCFNIDVKHPRVFTGPEDTQFGFSVLQHEAEGEKLMLVGA
PWDGPPNNRKGDVYKCVVGEEKNSNCSKVNLGETALRNVSKNLRNSHLGMTLTPDSPDGF
LACAPLWSQECGTSMFSTGICASVGDDLEPRKTIAPTEQKCQTFMDIVIVVDGSNSIYPW
SEVQNFLSNILSKFHISLDQMQVGILQYAEIVVHEWSLKDYQTTQEVVDAAKNISRQEGR
ETRTASAIKVACTEAFSADRGAREGATKVMIVVTDGESHDGDELPEALDECESRNITRYA
IAVLGYYIRKQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNQSTFHMEMSQIGFSTHTLDDGILFGIVGAYDWDGGVLKEGANGVIVPPREAFESEFP
LELKNHAAYLGYTVSSVVIGDWRRLYVAGAPRFKHKGKVILFELHEDGYVDIVQALNGEQ
IGSYYGSEVCGLDIDKDGITDVLLVAAPMYLGSGNKEAGKVYIYTLNGEGIFISNGTLKS
EEKSQDARFGYAMAAAPDLNHDGFTDLVVGAPLEDEHRGAIYVYHGHDIYILHDKKQHIL
GSSLSSSLQYFGRSVSAQLDLDGDDLIDLAVGAQGKAVLLSSRSIVQINVSLSFQPHSIN
VIQKTCQRGGRESACLNATACFTAISRSPGSLSKSFALWVTAMLDDRKFSARALFDESSH
RQTQLSLRVQTRKTRCYKLPFHVYDTADYIRPISFFLKFKINDTATGPVLDKDSPRNVTK
FIPFFKDCGEDDVCTTDLVLQAHMDISGTRQKPYVIRSPRRRLAVEVQLENRLENAYNTS
LKLHYSRNLHFSSLSFKEDTSFKIECTALGSNSHSCNISYPVFRSHSKIKFLLEFEFSCT
VLHNRVQMKLNATSESSEREETLGDNSVQLVNYVQYEPDVFVSSESNLNRYEVHPTRAAS
EAMGPEFYTHIRLLNIGCYSLSNLELRVLLPSVAAEDVVFMTVTEVFTYNATGIKCSMLS
DVTQLKSRQRDVRPLHPEDMMRDEILNCSSSWCTEVVCEVKQLGQQAIIRISRRVHDDFF
RKVKYKSVKIIGAYSLSAQDPNLITLGIGTVPGETVLEVLKGRAIPISLWILIGSVIGGL
LLLALIIFILWKLGFFTHKHREDENHED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcaaatatctgttgtgcctggagtttctcctactcctgaaagggttttgt
caatgtttcaacatagatgtcaaacatcctcgtgtcttcaccggtcccgaggacacccag
tttggcttctctgtccttcagcatgaagcagaaggagagaaactgatgcttgttggtgca
ccctgggatgggccacccaacaacaggaaaggagatgtgtacaaatgtgtggtaggggag
gaaaaaaactcaaactgtagtaaagtaaaccttggtgaaactgctctgcgtaacgtttct
aaaaacctgaggaattctcatcttggaatgaccctcacaccagactcacctgatggattt
ttggcgtgtgcccctctgtggtcccaggagtgtgggacatcaatgttcagcaccggcatc
tgcgcctctgttggtgatgacctggaaccgagaaaaaccatcgctccaactgagcaaaag
tgtcagaccttcatggacattgtgattgttgtggacggctcaaacagcatctacccctgg
tccgaggtccagaacttcctcagcaacatcctcagcaagttccacattagcttggaccag
atgcaggttggtatactgcagtatgcagaaatagtagtccatgagtggtctctgaaggac
taccagaccacacaggaggtggtggacgctgccaagaacatcagccgacaagagggacgg
gagacacgtactgcatccgccatcaaagtcgcctgcaccgaggcattcagtgctgatcgt
ggagcgagggagggcgccactaaggtgatgattgtggtcacagatggggagtcgcatgac
ggggacgagcttccagaagcactggatgaatgtgaaagcagaaacatcaccagatacgcc
atagctgttctgggatattacatccgtaaacagcaggacccagagacttttattaatgag
atcaaatacatcgccagtgacccggacgaaaagtacttttttaatgtgactgatgaagct
gcactgaatgacattgtggatgctctcggagatcggatcttcactctggaaggtaccttg
ggctacaaccagagcacgttccacatggagatgtctcagattggcttctccacgcacaca
ctggatgatggcattctgtttgggattgtgggtgcctatgactgggacggaggagtgctg
aaggaaggggccaatggagtgattgtgccaccgagagaagcctttgaaagcgaatttcca
ttggagctcaaaaatcatgctgcctatttaggttacacagtgtcatctgtggtcatcggt
gactggaggaggctgtacgtagcaggagcccctcgatttaaacacaaagggaaagtcatt
ttatttgaacttcatgaagatggttatgttgacatcgtacaagcgttgaatggagaacag
attggatcctactatggaagtgaagtgtgtgggttagatatcgataaagacggcatcact
gatgttctcctggttgctgctcccatgtatctcggctctggaaacaaggaagctggcaaa
gtctacatctacaccctcaatggggagggaatatttatatctaatggtactctgaaatca
gaagagaaatcccaggatgccaggtttggttatgcaatggctgctgctccagacctaaac
catgatggctttactgacctggtggttggagctccgctggaggacgagcatagaggggcg
atttatgtctaccatgggcacgatatttacatcctccatgataaaaaacagcatatatta
gggtcgtccctctcctcatctctgcaatattttggccgtagtgtgagtgcacagttggac
ctggacggtgatgacctgatagatttagcagtgggagctcagggcaaagctgtgctgctc
agctcccgaagcatcgtccagatcaatgttagtttgtccttccagccacactccatcaat
gtcattcagaagacctgtcagaggggcggcagagagtcggcctgcctcaacgccacagct
tgtttcacggccatttcccgctcacctggatcacttagcaaaagttttgctctttgggta
acagccatgctggatgacaggaagttttcagcgagagctctgtttgatgagagctcccac
cgacaaactcagctttcactacgagtgcaaacaagaaaaactcgatgttacaaacttcct
ttccatgtatatgatacagcagattatattcgtccaatcagcttcttcctaaagtttaag
atcaatgacacagcaacgggtccagtgttggacaaagactcaccgagaaatgtcacgaaa
tttatcccgtttttcaaagactgtggtgaagatgacgtttgcacaacagatctggtcttg
caggcacacatggacatctcagggacaaggcagaaaccttatgtgattcgcagccctcgt
aggcgtctggccgtggaagtgcagctcgagaacaggctggaaaatgcctacaacaccagc
ctgaagctgcactactcacgcaacctccacttctctagcctcagcttcaaagaggatacc
agcttcaagatcgagtgtaccgctcttggctcaaacagccactcatgtaacatcagctac
ccagtgtttcgctctcattcaaagataaaatttttgttggagtttgagttcagctgcact
gttttacataatcgggtgcaaatgaagctcaatgctaccagtgaaagcagtgagagagaa
gaaactctgggggacaacagcgttcagctggtgaattatgttcagtatgagccagatgtt
tttgtaagcagtgagtctaacctgaaccgctatgaggtccaccccacacgggcggcttca
gaggccatgggcccagagttctacacacacatcaggctgcttaatattggttgttactct
ctaagtaatctggagctgcgtgtgcttctgccctctgtggctgcagaagatgtggtcttc
atgaccgtaacggaagtcttcacatacaacgccacaggaataaagtgcagcatgctgagt
gatgtgacccagctaaaatccagacagagagacgtccgtccccttcaccccgaggacatg
atgcgtgatgaaatactgaactgcagtagctcatggtgcacagaagttgtctgtgaggtg
aaacagctcggccagcaggctattatacggatcagccgcagagttcatgatgactttttc
agaaaagtcaaatataagtctgtgaagataattggtgcctacagcctgtcagctcaggat
cctaacctcatcactctggggataggaacagtcccgggggagactgtgttggaggtgctg
aagggccgagcgattcccatttcactctggattctgatcggcagcgttataggtggtttg
ctgctgctagcgcttattatatttatactgtggaagctgggattcttcacacataaacac
agagaagatgaaaaccatgaagactga
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integrated database retrieval system
