Cyprinodon variegatus (sheepshead minnow): 107088868
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Entry
107088868 CDS
T06110
Symbol
rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein isoform X1
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107088868 (rere)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107088868 (rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
DUF7952
Myb_DNA-binding
CCDC47
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
107088868
NCBI-ProteinID:
XP_015236797
Ensembl:
ENSCVAG00000006594
LinkDB
All DBs
Position
Unknown
AA seq
1547 aa
AA seq
DB search
MTADKEKEREKERDRDRDRDRDKREAGKSRRQDGDRGESESSRPRRSCTLEGGAKNYAES
EHSEDEDNDNGSTGGGSGTAEEAGKKGKKKMPKKKSRYERTENGEITSFITEDDVVYRPG
DCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRNNEND
SGRELVITDPVVRSRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFRARIDSFFYIL
GYNPETRRLNSTQGEIRVGPSHQAKLPELQPFPSPGGQAVTENEELVWMPGVNDCDLLMY
LRAARSMAAFAGMCDGGSTEDGCLAASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPK
LIEKCWSEDEVKRFIKGLRQFGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASCRAH
RRHRRQPVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHC
FTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEEDGLGGKH
SMRTRRNRGSMSTLRSGRKKQTVSPDGRASPTNEDLRSSGRTSPSAASTDSTDSKTDSMK
KPSKKIKDEAPSPIKSAKRQREKGALDSEDPERASAKKSKTQELTRPDSPSECDGEGEGE
GESSDGRSINEELSSDPKDIDQDNRSSSPSIPSPRDNESDSDSSAQQQQLLQSQHPPVIQ
CQPGTSAASTAPVPPATSTPSLPPQVAPTAASTSLPPQPLSQTSPMSLIQSGASLHPQRL
PSPHSPLTQTQPPGSSAPHQSLPSPHHGPMPPMPHPLQPGPPHMPHPHAMTPQGFPVVPS
QVPTPSVSGQSQQRSHTPPPQSQPSSQSGGQPPREQPLPPAPMAMPHIKPPPTTPIPQIA
TPQSHKHPPHVSAPPFPQMPSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMSQQQLQPPP
AQPPVLTQSQSLPPSASHQPPPPPPLPPPAAASHPSGAPPQPPFSSHPFSTVLPPSGAPP
SSSNSMPSLQTPSSSSSAPSSSISMPLPASVSCAPPAQVVPPVHIKEEPPDEVEEPESPP
PPQRSPSPEPTIVNTPSHASQSARFYKYLDRGYNSCARTDYYFTPLASSKLAKKREEALE
KAKREAEQKAREEKEREREKEKEREREREREKEVERAAKASSSAHESRMGEPPMAGPAHM
RPPFDGPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFVSLNPADPLLAYH
MPSLYNADPAMRERELREREMREREIRERELRERMKPGFEVKPPEMDSLHPSTNPMEHFA
RHGALTLPPMAGPHPFASFHPGLNPLERERLALPGPQLRPDMTYPERLAAERLHAERMAT
VANDPIARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGGGECLVCPPGSGAHPLAVDPL
AAGPHLARFPYPPGSIPNPLLGQPPHEHEMLRHPVFGAPYPRDLPGGLPPQMSAAHQLQA
MHAQSAELQRLAMEQQWLHGHHHMHGGPLPGQEDYYSRLKKESDKQL
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgacaaagagaaggaacgagagaaagagcgggacagagacagagacagggat
cgggacaaaagagaggccgggaaatctcgacggcaggacggagaccgaggcgaaagcgag
agctccaggccgcgccgcagctgcacgctagagggcggcgccaagaactatgcagaaagc
gagcacagcgaagacgaggacaatgacaacggcagcaccggcggaggcagcggcacggcc
gaggaggccggcaagaagggcaaaaagaagatgcccaagaagaagtcccgctacgagcgc
acagaaaacggagagattacatctttcattacagaagacgatgttgtttacagacccgga
gattgtgtgtacattgagagtcggcgacccaatactccctacttcatttgtagcattcag
gatttcaagctgagtaaacgggaccatctgctgatgaatgtgaaatggtactaccgccag
tcggaggtgcccgactccgtgtaccagcacctggtgcaggatcgcaacaatgagaacgat
tctggtcgtgagctggtcatcacagacccagtggtcaggagtcgagaactcttcatttcg
gactatgtggacacatatcatgctgctgctctcagggggaaatgcaacatttcccatttc
tctgacatttttgctgcacgcgagttcagagctcggatcgactccttcttctacatcctg
ggatacaacccagagaccaggcgattaaacagcacacagggggagatccgagtgggaccg
agtcaccaggccaagctcccagagctgcagcctttcccctcccctggtggccaggccgtg
actgagaatgaggagctggtctggatgccaggggtcaacgactgtgaccttcttatgtac
ctcagagctgcaaggagcatggctgcctttgctgggatgtgtgatggaggatcgacagaa
gatggttgtctagccgcctctcgagatgacactacattaaacgcacttaacacacttcat
gagagcagctatgatgcaggcaaggctctgcagcgtctggtgaagaagccggtacctaaa
ctgatagagaagtgctggtctgaggacgaagtgaagcgcttcatcaaagggctgaggcag
tttggcaaaaacttcttcaggatccggaaagagctgctgcccaacaaagaaacgggagag
ttgatcaccttctactactactggaagaagacgccagaggccgccagctgccgagctcac
agaagacaccgccgccagcctgttttccgccgcatcaagacacgaaccgcctcaactcct
gtcaacaccccctcacgcccgccctcaagcgagttcttggacctgagctctgccagcgaa
gatgactttgacagcgaagacagtgaacaggagctgaagggctacgcctgccgacactgc
ttcactaccacctccaaggactggcaccacgggggccgggagaacatcctgctgtgcacc
gactgccgcatccacttcaagaagtacggggagctgccacccatcgagaagcccgtggac
ccgccgccatttatgttcaaacccgtcaaagaggaagaggatggactcggcgggaagcat
agcatgaggactcgacggaaccgaggctcgatgtcaacgctacgtagtggtcgtaagaag
cagacagtcagtcccgatggccgagcctcgcctaccaacgaggacctgcgctccagtggg
cgaacctcgccgagcgcagcgagcactgacagcaccgacagcaagacagactccatgaag
aagccaagcaagaagattaaagatgaagctccttcacctataaagagtgccaaacggcag
agagagaagggagctttagactcagaggacccggagagggccagtgccaaaaagtctaag
acacaggagctcacccggccagactcgccatcagaatgtgatggggagggagaaggggag
ggtgagagctctgatgggaggagcatcaacgaggagctcagcagcgatccaaaagacatc
gaccaggacaaccggagctcatccccaagcatcccgagcccccgcgacaacgagagcgac
tcggactcttcagcccagcagcagcagctcctgcagagccagcaccctccggtcatccag
tgccaaccaggcacctcagctgcctctacagcaccagttccacctgcaacctcaaccccc
tccctgcctccacaggtggcccccactgctgcttccacctctctacctcctcagcctctg
tcccagaccagccccatgtctctaatccagtctggggcgtcgcttcaccctcagaggtta
ccgtctcctcattcacctctgactcagactcagcctcctggttcctcagccccacaccag
tctctacccagcccccatcatgggcccatgccccccatgccacacccactacaaccaggt
cctcctcacatgcctcatccacacgccatgacccctcagggattccctgtggttccctct
caggtcccgaccccatctgtctctggtcaatcacagcagaggtctcacactcctcctcct
cagtcccagccatcctctcagagtggaggccagccccccagagagcagcctctgccccct
gcacccatggccatgcctcacatcaagccccccccaactacccccatccctcagatcgcc
accccacagtctcacaaacacccgcctcacgtgtcggcgcctccgttccctcagatgcct
tcaaacttgcctccacctcccgccctgaagcccctcagctctttatccacgcatcatcct
ccgtcagcacacccccctcccctccagctcatgtctcagcagcagctccagcctccaccg
gcccagcctccggtcctcacccagtcccagagccttcccccttcggccagccaccagcct
cccccaccacctcccctcccacctcccgctgcggcgtcacatcccagcggggcaccgcca
cagccacctttctcctcacatcctttcagcacagttctacctccaagcggcgccccaccc
tcctcgtccaactctatgcctagcttacagacgccgtcgtcgtcttcatccgccccgtcc
tcttccatctccatgccactccccgcctcggtcagctgcgctccccccgcccaggtggtg
ccgcctgtccatatcaaagaggagcctccagatgaggtggaagagcctgagagcccgcct
cccccacagaggagcccctccccggagcccaccattgtcaatacgcctagtcacgccagc
cagtcagcacggttctacaagtacctggaccggggttataactcgtgcgctcggacagat
tattacttcactccactggcttcgtctaagttggccaaaaagagagaagaagctctggag
aaagcgaagcgggaagcggagcagaaagccagggaagagaaggagcgggaaagggagaag
gaaaaggaacgagaaagagagcgtgagcgagagaaggaggtggagcgtgcagcgaaagct
tccagttctgctcatgaaagtagaatgggggagccccccatggccggccccgctcacatg
cgtcccccattcgacggccccccaactacaatcgcagcggtgcctccttacatcggcccc
gacacacccgccctgcgcaccctcagcgagtacgccagaccccacgtcatgtcccccacc
aacagaaatcacccgttcttcgtctccctgaaccccgcagacccgctgctggcctaccac
atgcccagcctttacaacgccgacccggccatgcgggagcgggagctacgagagcgagaa
atgcgggagagggagataagggagcgggagcttagggaaaggatgaaaccgggcttcgaa
gtcaaacctccagaaatggactcgctccatccttcaacaaatccaatggagcacttcgcc
cggcacggggccctcaccttacctcccatggccggccctcacccctttgcctccttccac
cctggcctgaacccattggagcgcgagcggctagccctgccggggccccagctacggccg
gacatgacttacccagaaaggctggctgcagagcggctccacgctgagaggatggccacg
gtggccaacgaccccatcgcccgactgcagatgttcaacgtcacgccgcaccaccaccag
cactcacacatccactcccatctccacctccaccagcaagatccgctccaccaaggtggt
ggtgaatgtcttgtctgtcctccagggtcgggggcccacccgctggccgtagatcccctg
gcagccggacctcacctggcgcgcttcccctacccgcccggcagcatccccaaccctctc
ctgggccaaccgccgcacgaacacgagatgctacgccacccggtcttcggtgctccatac
ccacgggacctaccaggaggtcttccaccacagatgtccgcagcccaccagctgcaggcc
atgcacgcccagtcagctgagctccagaggctggcgatggagcagcagtggctccatggg
caccatcacatgcacgggggccctctgcctggtcaggaggactactacagccggctgaag
aaggaaagcgacaagcagttgtaa
DBGET
integrated database retrieval system
