Cyprinodon variegatus (sheepshead minnow): 107088877
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Entry
107088877 CDS
T06110
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00310
Lysine degradation
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107088877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107088877
03036 Chromosome and associated proteins [BR:
cvg03036
]
107088877
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
107088877
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107088877
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107088877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2H2_6
zf-C2HE
zf-C2H2_8
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
107088877
NCBI-ProteinID:
XP_015236817
Ensembl:
ENSCVAG00000006185
UniProt:
A0A3Q2CIF0
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MTAAATLCEGQISVSSVRMDDSSNLYVSDLGEKEGTQEHLDISWEHIYSHRLPIKDQDAF
VCQDCNRCFTSKQGLEQHMHVHHPYQSLEKISTSPDRQHQECSIQDNQQQPKMKENAELS
QEEIPEALLSESLHQQTQTEKTVSAAVLENNGEEAEQFMLDMSSNISENLGFYIDGNILS
TGTVNNCEMAIHSGSSPLVGLDALIVGAAQIGQVLNTDAETPGQQQSKRRTATPPLLPQI
KTELQSEVVVSLSSSSQLSPSVSIQEESMVFLSPKLKQLVEKQEVFKPTTTLTADGQNPS
IPISLSVLSSGSGKFRRRTSSPTGSPQQTPAANEETGELDPLDLGEGGNRQIEVKHNSPV
QPTGTDNIDMAQTITVSEVSPLSSESWTTATGGNPCNQRPLDLSNTVKRNEDEASAEAAL
DLSLQRKSPGEPELIFKGLNSNLMEKVLIKSHLNTETPVVTDLTLVTGPDIVSPLEHVTE
GLVYGIAIPPNSLTPSTASLTPLTLEPSAQCAIAFASPVTHTVLPSAPSIITVLAPPISN
PSSPPIQVLAPNISPEPLVICTDERINASQCDLTAAFASANSANIVTLSQPLDPTLNLPG
HVFLTDQIALDQQMVDSVPMSEVPFPAALNLNDSLLSIASNTVLIECTIALEAPGNVGPT
SVALQENSAEPPDPDQIVISHKEQQQISSLPDPPPVDPVVPISSIAESLAPTPNTPLMSD
PPPVLDSRPDPEPVCTELPPKEAEEVFDRSVSTSPNTSPSPPSGKTEEEPSHETEVNAEE
QTFAKNFICNVCDKLFHSMKELSHHVAEHADEWPYKCEFCVLLFGKPSALLDHRSSLHGV
GKTYVCSVCTKDFVYLCNLKQHQNELHPGQQCSYTEEEKGKLRPQNYNNTIKTNTDPSAT
KLGDKSIKSVKKEECDVDIAADEVFTTVLTLDGGKIKGPDVRLGINQHYPSFKPPPFPYH
NKSPAGSLASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKKRYTP
KKNPVPLRHFAKTQNGVLSTTNSANGQNTSVRISQANRSKPSQDAPVKIKLLNKRKKKFV
QRIMPHRNKSISSTNKLSPTQVEIFVCPHCSREFTMRRSRTKHMAVCPQKLKEMKKRKEG
GISLTKENNEHSLRGVSHLKEKLQAPPRHNTRLQTSGSAKRPSILPVQTVFSSKRSKIII
KESIQPKLEAPALAQVPIRTFNPSMRQYSRMQHSIKGIPIKITFVKPSQKDEAAASQIQG
VAPGTITGCSKQKTST
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagcaaccctgtgtgaaggacagatatcagtatcctcagtgagaatggat
gactcttccaacttgtacgtctctgatcttggagaaaaggagggtacacaagaacatctg
gatatcagctgggagcatatatactctcacaggctccccatcaaagatcaagacgctttt
gtctgccaggactgtaacagatgctttacctccaaacaaggcttagaacagcacatgcat
gttcatcacccttatcaatctttagagaaaatttccacaagtccagacagacagcaccag
gagtgcagcatccaggataaccaacagcagcctaaaatgaaggaaaatgccgagctgtcg
caagaggaaattcctgaagcgttactaagtgagtcattacaccaacagacacaaaccgag
aaaactgtttctgcagctgttttggaaaataacggagaagaagcagagcaattcatgcta
gatatgtcaagtaatatttcagagaatcttggcttttacattgatggaaatatactgtca
acaggtacagtaaataactgtgagatggcgatacactctgggtcctcacctttagtcgga
ctggacgccctaattgtgggtgctgcccagattggccaagttctaaacacagatgcagag
acacctggtcaacaacaatccaagagaagaaccgcaacacctccccttctaccacagatc
aaaactgaactgcagtctgaggtggttgtgtctttatcctcgtcatcccagctgtcgccg
tctgtgagcattcaggaggaaagcatggtgttcctttctccaaagcttaagcagcttgtt
gagaagcaggaggtttttaaacccacaacaaccctcactgctgatgggcagaatccctct
atacctatctcactctcagtcctatcctctgggtcaggaaaatttaggagaagaacaagc
tccccaaccggttccccgcagcaaactccagcagcaaatgaagaaacaggagagctggat
ccattagatttgggtgaaggaggtaaccgacagattgaagttaaacataactcacctgtt
cagccaacaggaactgataatattgacatggctcaaacaatcacagtgtcagaagtcagt
cctttatcatctgagagctggaccacagcaactggtggtaatccctgtaaccagcgaccc
ctggatctctccaacacagtcaaaagaaatgaagatgaagcgtcagctgaagctgctcta
gatttaagtttacaaagaaagagccctggtgaacctgaactgatatttaagggtttaaat
tcaaatctcatggaaaaggttttaattaaaagccacttgaatacagaaactcctgtagtc
acagatttaactcttgtaacgggtccggacattgttagcccactagaacatgtcactgag
gggcttgtttatggaatcgccataccacctaattccctgactccgtccactgcgtcgctt
actcctcttaccttggaaccatctgcacaatgcgccatagcatttgcttcccccgtcact
cacactgtactcccttctgctccctcaataatcacagttttagcaccacccatttccaat
ccttcaagcccacccattcaagtactcgccccaaacatatcacctgagcccttggtaatc
tgcacagatgaaagaattaatgcctcacagtgcgatttgactgctgcatttgcctctgca
aattctgcaaacattgtcactctctcccagcctcttgacccaactctgaaccttcccggc
catgtgtttctcactgatcagattgcgctagaccaacagatggttgattctgttccaatg
tcagaggtaccatttccagccgctttaaatttaaatgattctctgctcagcattgccagc
aacaccgtcttaatagaatgtacaatagctctggaagctccaggaaatgttgggccaact
tcagtggctttacaagagaattctgcagagcctccagatcctgaccaaatagtcattagt
cacaaagaacagcagcagatttcatccttgcctgaccctccacctgttgaccctgtagtt
cctatttcttccatcgcagaatctttagcccccactcccaacaccccactgatgtctgat
ccccctcctgtgctagattcaagacctgatccagaacctgtttgtacagagcttcctccc
aaagaagctgaggaagtttttgataggtctgtttctacgtcaccaaatacctctccttca
cctccttctggcaaaactgaggaagagccctcccatgaaacagaagttaatgctgaggaa
cagactttcgctaaaaacttcatctgcaatgtgtgtgacaagctcttccattcaatgaaa
gaacttagccatcatgtagctgagcatgctgatgagtggccctacaaatgtgagttctgc
gtgctgctatttggcaagccatctgctctgcttgaccatcgatcgagcctccatggtgtc
ggaaagacgtatgtttgcagtgtatgtacgaaagattttgtctacctttgcaatctgaag
cagcatcaaaatgagctgcatcccggtcagcagtgctcatacacagaagaagaaaaaggc
aaacttagacctcagaactacaataacacgattaaaaccaacacggatccttcagccact
aaattgggagataaatccataaaatccgtgaaaaaggaagaatgtgatgttgacattgct
gcagatgaggtgttcacaacagttctgactttggatggaggtaaaattaaagggccggat
gttcgtcttggcataaaccagcattatcccagcttcaagccacctcctttcccttaccat
aacaaatcccctgctggctcacttgcttcagctacaaacttcacaactcacaacatccca
caaaccttcagtacagctattcgttgcaccaagtgtgggaaaagctttgacaacatgcca
gagctgcacaagcacatcttggcatgtgcaaatgcaagcgataagaagcgatacacacca
aaaaaaaatcctgtccctttacgccattttgctaaaactcagaatggagtactgtccacg
acaaattctgctaacggacaaaacacctcagtcagaatcagccaggcaaaccggtccaaa
ccaagtcaagacgcaccggtcaagatcaaactacttaataaacggaagaagaagtttgtc
cagaggataatgcctcatagaaacaagtcgatttcctcaacaaataaactgtcacctaca
caggtagagatctttgtctgcccacactgcagcagggagttcacaatgcgacgcagcagg
accaaacacatggccgtctgtccccaaaaactcaaagagatgaagaaaagaaaagaggga
gggatctctctcacaaaagaaaacaacgaacactcgcttcgaggagtttcccatttaaag
gagaaactgcaagctccgcctcggcataacacaagactccaaacatctggctctgcgaag
aggccttccattctcccagtgcaaaccgtcttctctagcaagcgaagtaaaattatcatt
aaagagagcatacagccaaagctggaagcgcccgcactggcacaggttcccattcgcacg
tttaacccctctatgcggcagtacagcagaatgcagcacagcatcaaaggtattcccatt
aaaatcacttttgtgaaaccttctcagaaagatgaagctgctgcctctcagattcaagga
gtagcacctggaaccatcaccggctgctctaagcagaaaacctccacttga
DBGET
integrated database retrieval system
