Cyprinodon variegatus (sheepshead minnow): 107088892
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Entry
107088892 CDS
T06110
Symbol
nvl
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107088892 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvg03009
]
107088892 (nvl)
Ribosome biogenesis [BR:
cvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107088892 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
AAA_16
AAA_2
RuvB_N
AAA_22
AAA_5
NPHP3_N
AAA_14
Mg_chelatase
AAA_33
ATPase
ABC_tran
AAA_28
RNA_helicase
nSTAND3
TIP49
Zeta_toxin
NACHT
Sigma54_activat
AAA_18
NB-ARC
Rad17
IstB_IS21
AAA_17
TsaE
Vps4_C
AAA_3
nSTAND_NTPase5
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
107088892
NCBI-ProteinID:
XP_015236847
Ensembl:
ENSCVAG00000005631
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MKNRGGGGWMDTRLKQRVEQYMASSSSEYVDLAEMAVDLQRQFRMDYGRRNKTAFRIQVE
KVFKAVKEEVELNDLESKHLAKRARSSCNETRDSSSSSEDSSDSDEQVLGNTPNSSVTAL
YRKGPTAAGRTNPAQNEGTVVSPGGWFIDKGRGPTTRPVFIDLSKDESVDTEANRGASQL
EPETKRSKKRSKNSAHSADSQGVIKNKKAKSKSPELQYPHLRFEDVGGNEEILTEVCKLL
VHMRHPEVYQHLGMVPPRGFLLHGPPGCGKTLLAQAVAGVSQAAEKRCVRLGAGFIXQRM
RGCGFVFQELQIPMLKVSAPELVSGVSGESEQKLRELFELAMTSSPCIVFIDEIDAITPK
REVASKDMERRIVAQLLTCMDDLNSLTVTAQVLVIGATNRPDSLDPALRRAGRFDREICL
GIPDEGARLRILRTLCRKLTLPADFNYQQLARLTPGYVGADLMALCREAAMAAVNRVLLE
TRPLAQTPPDCPEQPSGSPEQMEAVTDEVVRTEQEGELQQLLGILKNTDTLSEQELAGLC
ILMSDFQDALGRVQPSAKREGFATVPDVTWENVGALQDIREELTMAILAPVRSPEQFRAL
GLSAPSGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRG
RNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRKQVFIMAATNRPDII
DPAVLRPGRLDKTLYVGLPCAADRHAILMTVTKGGTRPQLEQDVRLEDIAFDERCSSFSG
ADLTALVREASVNALKVFMKSQLSGQTHPSGSTADIKVTKQNFEDAFKTIQPSVSKKDQL
MYERLRESLSR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgaggaggaggaggctggatggacactcgcctgaagcaacgagtggagcag
tatatggcctccagcagcagcgaatatgtggaccttgcagaaatggccgtggaccttcag
agacagttcaggatggactacggacggagaaacaagacggcctttaggatccaggtggag
aaagtgttcaaggccgtcaaagaggaggtggagctaaacgacctggaaagcaaacatctg
gccaagagagcccggagcagctgcaatgagaccagggacagcagcagcagctcggaggac
tcctcagacagcgatgaacaggtgctgggaaacacgcccaacagttcagttacagccctg
taccgtaagggccctactgcagcaggcagaaccaacccagctcaaaatgaaggcaccgta
gtttcccctggaggctggttcattgacaaaggcagaggccccacgacacgacccgtcttc
atcgacctttcgaaagacgagtcagtggacacagaagcaaatagaggtgcatcccaactg
gagcctgagacgaagaggtcaaagaagaggtcaaagaactcggcccattctgcagactcc
cagggagtgatcaagaataagaaagcaaagtccaagtccccagagctgcagtatccccac
ctgaggtttgaggatgtcgggggtaatgaggagatcctaacggaggtgtgcaagctgctg
gttcatatgcgccacccagaggtctaccagcacctcgggatggttcctcccaggggcttc
ctgctgcacggacctcctggctgtgggaagaccctgctggcccaggctgtggctggggtg
agccaggctgcagaaaagcgatgtgtccgtctgggagctgggttcatttagcagagaatg
agaggctgtgggtttgtgtttcaggagctgcagatccccatgctgaaggtgtctgctcca
gagctggtatctggggtgtcaggagagtcggagcagaagctcagagagctgtttgagctg
gctatgacctccagtccatgcattgtgttcatcgatgagatagatgccatcacgcctaag
agagaggtggcttccaaagacatggagaggaggatcgtggcccagctgctgacctgcatg
gacgatttgaacagtctcacagtgactgctcaggtactggtgatcggcgccaccaacagg
ccggactccctggatccggccctccgcagagccggccggtttgacagagaaatctgtctg
gggattcccgatgagggcgctcggctcaggatcttgaggaccttatgtcggaagctgaca
ctgcccgcggatttcaactaccagcagctggcccggctcactccaggctacgtgggagcg
gacctcatggctctgtgccgggaagctgctatggctgccgtgaaccgggttctgctggaa
accaggccattggcccagactccgccggactgccctgaacaaccgtcaggaagtccggag
cagatggaggctgtgactgatgaggttgttagaactgagcaggagggagaacttcagcag
ctccttggcatattgaagaacacggacacgctgtcggagcaggagctggctggactctgc
atcctcatgtccgactttcaggacgctctgggccgggttcagccttcagccaagagggag
ggctttgccacagtaccagacgtgacctgggagaacgtaggagctctgcaggacatcagg
gaggagctcaccatggcaatactggctcctgtccggtctccggagcagttcagagccctg
gggctcagcgcaccatctggggttctgctggccgggcctccaggctgtgggaagaccctg
ctggctaaggcagtggcaaatgagtcaggcctcaacttcatctccgtcaaaggtccagag
ctgctaaacatgtatgtgggggagagcgagcgagccgtccgccaggtcttccagagagga
cgcaactctgctccttgtgtcatcttcttcgatgagattgacgccctgtgtcctcgccgt
tcaggccacgagtcaggagccagtgtgcgggtcgtcaatcagctgctgacagagatggac
ggcttggagacgcgaaaacaggtcttcatcatggctgcaaccaacaggccggacatcatt
gatcctgccgtcctgaggcctgggcgcctggataaaaccctatatgttgggctgccgtgt
gccgcagaccgccatgccatcctgatgactgttactaagggtgggaccagacctcagctg
gagcaggacgtccgccttgaggacatcgcctttgatgaacgctgtagttccttttcagga
gctgacctgacggcgttggtgagggaagcgtctgtaaacgccttgaaggtcttcatgaag
tcccagctttctggtcagacccacccctctggctccacagccgatatcaaggtcaccaaa
cagaactttgaggatgccttcaagaccattcagccatccgtgtccaaaaaggaccagctg
atgtatgagaggctcagggagtccctcagcagatga
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