Cyprinodon variegatus (sheepshead minnow): 107088912
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Entry
107088912 CDS
T06110
Name
(RefSeq) B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04371
Apelin signaling pathway
cvg04514
Cell adhesion molecules
cvg04520
Adherens junction
cvg05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
107088912
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107088912
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107088912
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107088912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvg03036
]
107088912
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvg04515
]
107088912
04090 CD molecules [BR:
cvg04090
]
107088912
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
107088912
Cell adhesion molecules [BR:
cvg04515
]
Cadherins
Major cadherins
107088912
CD molecules [BR:
cvg04090
]
Proteins
107088912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_2
Antig_Caf1
TM_ErbB1
Cadherin_4
K319L-like_PKD
RibLong
Motif
Other DBs
NCBI-GeneID:
107088912
NCBI-ProteinID:
XP_015236863
Ensembl:
ENSCVAG00000005547
UniProt:
A0A3Q2CGG9
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MGTAWFAVCGVLIVALQVAAVEETSCVPGFESELLIFKVTRKHLRQGTRLGKVGFTDCTD
RRRFLFSTDDSRFLVQPDGVLAVKRQVVLHEGHRDFFIHSWDSKGQKLTVPAMVMYDGHR
HGNNHPNTEHQHEGHKPNGQLHDQTEMDAAAEQDAANREVPVLLFPKSSGGLKRRKRDWV
IPPISVSENQRGPYPYRLNQIRSSEDSKKTIHYSITGPGADQPPIDLFTMDRNTGNLYVT
QELDREKQAEYRIWAHAVAEGSSGNAEDPMEIIIKVIDQNDNKPIFDQTTYVAEVPEATQ
KGTDVIQVTATDADEDNNANSEIAYRIEKQSPEEPSLDMFTINPKTGAIRVNAARLDREK
HPEYTLEVSAADMNGEGLAGSTKVIIKVTDSNDHAPVFTETSYKATIDENRVDAEVVRML
VTDGDEPHSSAWNAKFKIVGGDPGNLFTVKTGSNKQEGIITTAKGLDFEKISKHTLLVEV
LNEIPFAIQLPTYTATVEVTVNDVNEAPIFKPKDPTVTKSESLKEGTNVVKLIAEDPDTA
RKQKVMFKMYIDPAGWLEVSDEGLVTVRSKMDRESAFVSEGKYMAVIHAYDDDQVPATGT
GTLTIILEDVNDNAPSIEQREFRVCNKKPPPQILNVTDKDGPGNTSPYRVILHDTAKVNW
TAKMDDTKTAIVLSLIRELEEGEYSVRMTVTDTGNQYQESTVKAHVCECTGEEVMCKGRA
AAGSNLPVILGILGGILLLLMLVLLLLLFARRKKPEKEPLLLQDDDIRDNIYYYDEEGGG
EDDQDFDLGVLHRGLDNRPEVFRNDVAPMFMTAPVYKPRPANPDDIGNFIGDNLKAADND
PTAPPYDSLLVFDYEGGGSEAGSLSSLNSSSDGDQDYDCLADWGPRFKKLADMYGGGDDD
ML
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcttggtttgcggtttgtggcgttttaatcgtcgccttgcaggtggcggct
gtggaggagacgtcatgtgtgcctggatttgagtccgagctgctgatattcaaagtgacc
agaaagcacctgaggcaaggcaccagactgggcaaagttggcttcacagactgcacggac
cgcaggcgatttcttttcagcaccgatgacagccgttttctggtacagccagatggagtt
ttggctgttaagagacaagttgttcttcatgagggccacagagacttcttcatccactcc
tgggattcaaagggtcagaagttgactgttccagccatggtgatgtatgatggtcatcgc
catggaaataaccaccctaacactgagcaccaacatgaaggtcataaaccaaacggccag
ctccatgatcagactgagatggatgctgcagcagagcaggatgcagcgaatcgagaggtt
cccgtcctgcttttccccaaatctagtggcgggctgaaaaggaggaagagagactgggtt
atccctccaataagtgtttctgagaatcagaggggaccatatccttataggcttaatcag
atacgctctagtgaagacagcaaaaagacgatccattacagcatcactggtccaggagca
gatcagcctcccattgatcttttcaccatggacaggaatactggtaatctgtatgtcaca
caggaactggacagagagaaacaggcggaatacaggatctgggctcatgctgtggcagag
ggaagttctggaaatgcagaagatcctatggaaataataatcaaagtgatcgaccagaat
gacaataaaccaatttttgatcagactacctacgtggcagaagttcctgaggccacacaa
aaaggtactgatgtaattcaggttacggccacagacgccgatgaggataataatgccaac
tctgaaattgcctaccgtattgagaaacagtcgccagaagaaccatcccttgacatgttt
actatcaaccctaaaactggagccatcagagttaatgctgctaggctggacagagagaaa
caccctgagtacacactggaagtaagcgctgccgacatgaatggggaaggcttagctggt
tctaccaaagtgattatcaaggtgactgacagcaacgatcatgctccggtttttaccgag
acatcttacaaagcaacaattgacgagaatagagtagatgctgaagttgttcggatgttg
gtgacagacggtgatgagccacattcttccgcctggaatgcgaagttcaaaatcgtcggt
ggagatcctggtaatttgttcactgtgaaaacaggaagtaacaaacaagaaggaatcatt
actactgcgaagggtctggactttgagaaaattagcaagcataccctgctggttgaagtg
ctgaatgaaattccttttgctattcaattgcccacttacactgccacagtggaggtgact
gtaaacgacgtcaatgaagccccgatatttaaaccaaaagatcccactgtgaccaaatcg
gagagccttaaagagggtaccaacgtggtgaagctcattgcagaggatccagacacagca
cgcaaacagaaagtcatgtttaaaatgtatatagacccagctggctggctagaggtctct
gatgaaggtctggtcacagtgaggagcaaaatggacagagaatccgcctttgtgagcgag
gggaaatacatggctgttattcatgcttatgatgatgatcaagtcccagccactggaact
ggcactttgaccattatacttgaggatgtgaacgacaatgccccgtccatagagcaacgg
gaattcagggtgtgtaacaagaaaccacctcctcagatcttgaatgtaacggataaagat
ggtccgggcaacacttctccatacagagtcatcttgcatgacacagcaaaggttaactgg
actgctaaaatggatgacaccaaaacggctattgttctgagtctaatccgtgagttggag
gaaggagaatacagcgtccggatgactgttacagacactgggaatcagtatcaggagagc
acagtcaaggctcatgtttgtgagtgcactggagaagaagtcatgtgcaagggaagagct
gctgcaggctcaaaccttcccgtcatcctgggaatactcggaggcatcctgctgctcctc
atgctcgtcctcttgctgcttctgtttgcaagaagaaagaagccagagaaggaaccactt
ttactccaagatgatgacattagagacaacatctactactatgatgaggagggaggtgga
gaggacgatcaggactttgatcttggtgtcctccatcgtggtttggacaaccgccccgag
gtgttcaggaatgacgtggccccaatgtttatgacggcacctgtatacaaacctcgaccc
gccaatccggatgatatcggaaacttcattggtgataacctgaaggcagcagataacgac
ccgactgctcctccctatgactccctactggtgtttgattatgaaggaggaggttctgaa
gctggaagcctttcctctctgaactcatccagtgatggagaccaggactatgactgcctc
gccgactggggccctcgattcaagaaactggcagacatgtacggaggaggagatgatgac
atgctgtaa
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