Cyprinodon variegatus (sheepshead minnow): 107088917
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Entry
107088917 CDS
T06110
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvg03019
]
107088917
03041 Spliceosome [BR:
cvg03041
]
107088917
Messenger RNA biogenesis [BR:
cvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107088917
Spliceosome [BR:
cvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107088917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_Nup35
Nup35_RRM_2
RRM_7
Calcipressin
MHC_I
RRM_3
Motif
Other DBs
NCBI-GeneID:
107088917
NCBI-ProteinID:
XP_015236867
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETASSKQL
SFDEVLNQSSLSNCTVYCGGVTQGLTEQLMRQTFSPFGQIMEIRVFPEKGYSFVRFNSHE
AAAHAIVSVNGTSIEGNIVKCYWGKETTDIVQGPIQQQNTLSFAAQPYNQWGQWYSNTQQ
IGQYVPNGWQVPSYGVYGQAWDQQGYNHLHAGAGWTGVGAVSNGGMVEAGQGVNGTMLTN
QAGMSTTGYPTH
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggccacaggtaaatctaaaggctacgggtttgtctccttcttcaacaaatgggatgca
gaaaacgccatccagcaaatgggagggcagtggttgggaggccgacagatcaggaccaac
tgggccacgaggaagcctgctcctaaaacaacgaatgaaacagccagtagcaaacagctc
tcctttgatgaggtgttaaaccaatccagcctcagtaactgtactgtctactgcggggga
gtcacacaaggtctcacagagcaattaatgagacagactttctcaccttttggccaaata
atggaaatccgtgttttcccagagaaaggctactcctttgtgaggtttaactcccacgaa
gcagcagctcatgccatagtttctgttaatggcacttccatagagggcaacattgtgaag
tgttactgggggaaggaaacaacagatatcgtacagggtcccattcagcagcagaacacc
ttgagcttcgctgcccaaccttacaatcagtgggggcagtggtacagcaacacacagcag
atcggtcagtacgtgcccaatggatggcaggtgccaagctatggcgtctatgggcaggcc
tgggatcagcagggctacaaccatttacatgctggagctggatggacgggcgtgggcgct
gtgagcaacggaggcatggtggaggctggccagggagtcaacgggacaatgctaaccaac
caggcaggcatgagcaccactggataccccacccactga
DBGET
integrated database retrieval system
